RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 CLPSL1A2RUU4 121 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 OXTP01178 125 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 ASIPP42127 132 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 PAX8Q06710 450 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 CIRBPQ14011 172 aaKnown RBP8.12□□□□□ -1.11
CDH1-214ENST00000621016 FBXL19-AS1Q494R0 122 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 Q8N6K4 173 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 ELANEP08246 267 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 MINOS1Q5TGZ0 78 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 FAM110DQ8TAY7 271 aaPredicted RBP8.12□□□□□ -1.11
CDH1-214ENST00000621016 BAALCQ8WXS3 180 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 MINOS1-NBL1R4GNA1 71 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 FBN2P35556 2912 aa8.12□□□□□ -1.11
CDH1-214ENST00000621016 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 HTN1P15515 57 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 PRR9Q5T870 116 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 NF1P21359 2839 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 JMJD1CQ15652 2540 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 LMO4P61968 165 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 MTORP42345 2549 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 SLC25A16P16260 332 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 NOTCH2Q04721 2471 aa8.11□□□□□ -1.11
CDH1-214ENST00000621016 H3BUX3 64 aa8.1□□□□□ -1.11
CDH1-214ENST00000621016 GNRH2O43555 120 aa8.1□□□□□ -1.11
CDH1-214ENST00000621016 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
CDH1-214ENST00000621016 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
CDH1-214ENST00000621016 DOPEY1Q5JWR5 2465 aa8.1□□□□□ -1.11
CDH1-214ENST00000621016 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
CDH1-214ENST00000621016 IGHV4-61A0A0C4DH41 118 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 PHLDA3Q9Y5J5 127 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 TEX15Q9BXT5 2789 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
CDH1-214ENST00000621016 F5H697 171 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
CDH1-214ENST00000621016 UCNP55089 124 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 UBE2D3P61077 147 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 UBE2D2P62837 147 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 JPT2Q9H910 190 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 C2orf82Q6UX34 121 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 SLC50A1Q9BRV3 221 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 U3KQK5 164 aa8.08□□□□□ -1.12
CDH1-214ENST00000621016 ACANP16112 2415 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 F8WDY8 70 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 H3BMM0 161 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 EBI3Q14213 229 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 C10orf99Q6UWK7 81 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 NIPBLQ6KC79 2804 aaeCLIP8.07□□□□□ -1.12
CDH1-214ENST00000621016 A0A087WWL8 130 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 Q6Q795 121 aa8.07□□□□□ -1.12
CDH1-214ENST00000621016 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 CFC1P0CG37 223 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 TAL2Q16559 108 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 IL17DQ8TAD2 202 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 TRAV12-2A0A075B6T6 113 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 TRBV7-1A0A0A6YYK4 115 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 ZNF415Q09FC8 603 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 LAGE3Q14657 143 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
CDH1-214ENST00000621016 UQCRQO14949 82 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 SCGB3A1Q96QR1 104 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 RHPN1-AS1Q9BWJ2 59 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 MOB4Q9Y3A3 225 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 CHD6Q8TD26 2715 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 IGHV7-4-1A0A0J9YVY3 117 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 ITLN2Q8WWU7 325 aaPredicted RBP8.05□□□□□ -1.12
CDH1-214ENST00000621016 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
CDH1-214ENST00000621016 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 TRACP01848 142 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 IGHV4-30-2A0A087WSY4 118 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 IGHV1-69DA0A0B4J2H0 117 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 IGHV1-69P01742 117 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 NPC2P61916 151 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 CCL19Q99731 98 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 A0A1W2PRX2 142 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 LGALS9O00182 355 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 Q8N8P6 123 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 PYGO1Q9Y3Y4 419 aa8.04□□□□□ -1.12
CDH1-214ENST00000621016 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
CDH1-214ENST00000621016 H7C1H1 209 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms