RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.87
SKP2-209ENST00000620197 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.87
SKP2-209ENST00000620197 IGHV3OR16-10A0A075B7F0 116 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 ANKRD29Q8N6D5 301 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 C20orf203Q8NBC4 194 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 A8MTW9 85 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 GATA3P23771 443 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 C10orf105Q8TEF2 133 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 AKAP9Q99996 3911 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 RHODO00212 210 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
SKP2-209ENST00000620197 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 H3BUX3 64 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 K7EQG2 157 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 Q8N1Y9 231 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 CITED1Q99966 193 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 VCX2Q9H322 139 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 PYGO1Q9Y3Y4 419 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 ID1P41134 155 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
SKP2-209ENST00000620197 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
SKP2-209ENST00000620197 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 HIVEP3Q5T1R4 2406 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 TMEM89A2RUT3 159 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 RNF183Q96D59 192 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 OPRPNQ99935 248 aaPredicted RBP9.62□□□□□ -0.87
SKP2-209ENST00000620197 DOPEY2Q9Y3R5 2298 aa9.62□□□□□ -0.87
SKP2-209ENST00000620197 A8MWV9 139 aa9.61□□□□□ -0.87
SKP2-209ENST00000620197 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
SKP2-209ENST00000620197 SPTBN4Q9H254 2564 aa9.61□□□□□ -0.87
SKP2-209ENST00000620197 A4D1N5 150 aa9.61□□□□□ -0.87
SKP2-209ENST00000620197 ELANEP08246 267 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 SRD5A1P18405 259 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 TMEM170BQ5T4T1 132 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 I3L3M4 83 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 NHLRC4P0CG21 123 aaPredicted RBP9.6□□□□□ -0.87
SKP2-209ENST00000620197 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
SKP2-209ENST00000620197 TGFAP01135 160 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 LY6EQ16553 131 aa9.6□□□□□ -0.87
SKP2-209ENST00000620197 SORL1Q92673 2214 aa9.59□□□□□ -0.87
SKP2-209ENST00000620197 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
SKP2-209ENST00000620197 RBMY1A1P0DJD3 496 aaKnown RBP9.59□□□□□ -0.87
SKP2-209ENST00000620197 RBMY1CP0DJD4 496 aa9.59□□□□□ -0.87
SKP2-209ENST00000620197 RBMY1FQ15415 496 aaKnown RBP9.59□□□□□ -0.87
SKP2-209ENST00000620197 PIMREGQ9BSJ6 248 aa9.59□□□□□ -0.87
SKP2-209ENST00000620197 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 AVPP01185 164 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
SKP2-209ENST00000620197 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 CENPEQ02224 2701 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 SLC25A20O43772 301 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
SKP2-209ENST00000620197 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
SKP2-209ENST00000620197 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
SKP2-209ENST00000620197 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
SKP2-209ENST00000620197 PF4P02776 101 aa9.57□□□□□ -0.88
SKP2-209ENST00000620197 RAX2Q96IS3 184 aa9.57□□□□□ -0.88
SKP2-209ENST00000620197 A0A0J9YXV3 536 aa9.56□□□□□ -0.88
SKP2-209ENST00000620197 F5H697 171 aa9.56□□□□□ -0.88
SKP2-209ENST00000620197 MSMBP08118 114 aa9.56□□□□□ -0.88
SKP2-209ENST00000620197 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
SKP2-209ENST00000620197 CSMD2Q7Z408 3487 aa9.56□□□□□ -0.88
SKP2-209ENST00000620197 ZNF56Q15929 161 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
SKP2-209ENST00000620197 C9JAW5 83 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 SETD2Q9BYW2 2564 aaPredicted RBP9.55□□□□□ -0.88
SKP2-209ENST00000620197 IGHV4-30-2A0A087WSY4 118 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 TMEM262E9PQX1 116 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 CRLF1O75462 422 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
SKP2-209ENST00000620197 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
SKP2-209ENST00000620197 SNRPD3P62318 126 aaKnown RBP9.54□□□□□ -0.88
SKP2-209ENST00000620197 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
SKP2-209ENST00000620197 ZFAND6Q6FIF0 208 aa9.54□□□□□ -0.88
SKP2-209ENST00000620197 PRORYQ9H606 182 aa9.54□□□□□ -0.88
SKP2-209ENST00000620197 A0A096LNT2 108 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 TINCRA0A1B0GVN0 87 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 LINC00467Q9BRT7 94 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 IGHV1-58A0A0C4DH39 117 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 SCGB1C2P0DMR2 95 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 TRIAP1O43715 76 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 ANAPC13Q9BS18 74 aa9.53□□□□□ -0.88
SKP2-209ENST00000620197 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
SKP2-209ENST00000620197 VSIG2Q96IQ7 327 aa9.52□□□□□ -0.89
SKP2-209ENST00000620197 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
SKP2-209ENST00000620197 C2CD3Q4AC94 2353 aa9.52□□□□□ -0.89
SKP2-209ENST00000620197 TIMM17BO60830 172 aa9.52□□□□□ -0.89
SKP2-209ENST00000620197 LINC01620Q4KN68 170 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms