RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 IBA57-AS1B1ANH7 110 aa10.75□□□□□ -0.69
BRCA1-228ENST00000618469 KRTAP10-2P60368 255 aa10.75□□□□□ -0.69
BRCA1-228ENST00000618469 EREGO14944 169 aa10.74□□□□□ -0.69
BRCA1-228ENST00000618469 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
BRCA1-228ENST00000618469 TEX261Q6UWH6 196 aa10.74□□□□□ -0.69
BRCA1-228ENST00000618469 ZNF727A8MUV8 499 aa10.73□□□□□ -0.69
BRCA1-228ENST00000618469 PSCAO43653 123 aa10.73□□□□□ -0.69
BRCA1-228ENST00000618469 GATCO43716 136 aaKnown RBP10.73□□□□□ -0.69
BRCA1-228ENST00000618469 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
BRCA1-228ENST00000618469 SRP19P09132 144 aaKnown RBP10.73□□□□□ -0.69
BRCA1-228ENST00000618469 LAGE3Q14657 143 aa10.73□□□□□ -0.69
BRCA1-228ENST00000618469 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
BRCA1-228ENST00000618469 A0A087WTM6 91 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 NTF3P20783 257 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
BRCA1-228ENST00000618469 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-228ENST00000618469 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
BRCA1-228ENST00000618469 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
BRCA1-228ENST00000618469 H7C1H1 209 aa10.71□□□□□ -0.69
BRCA1-228ENST00000618469 TWIST1Q15672 202 aa10.71□□□□□ -0.69
BRCA1-228ENST00000618469 NIT1Q86X76 327 aa10.71□□□□□ -0.69
BRCA1-228ENST00000618469 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
BRCA1-228ENST00000618469 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
BRCA1-228ENST00000618469 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.7
BRCA1-228ENST00000618469 A0A087WX48 190 aa10.7□□□□□ -0.7
BRCA1-228ENST00000618469 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
BRCA1-228ENST00000618469 M0QY20 66 aa10.7□□□□□ -0.7
BRCA1-228ENST00000618469 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
BRCA1-228ENST00000618469 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
BRCA1-228ENST00000618469 A8MWL6 223 aa10.69□□□□□ -0.7
BRCA1-228ENST00000618469 CT83Q5H943 113 aa10.69□□□□□ -0.7
BRCA1-228ENST00000618469 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
BRCA1-228ENST00000618469 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-228ENST00000618469 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
BRCA1-228ENST00000618469 PGLYRP4Q96LB8 373 aa10.68□□□□□ -0.7
BRCA1-228ENST00000618469 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
BRCA1-228ENST00000618469 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 RASL11AQ6T310 242 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 KLK12Q9UKR0 248 aa10.67□□□□□ -0.7
BRCA1-228ENST00000618469 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 C9JQL5 133 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 TMEM262E9PQX1 116 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 SRSF3P84103 164 aaKnown RBP10.66□□□□□ -0.7
BRCA1-228ENST00000618469 PEA15Q15121 130 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
BRCA1-228ENST00000618469 TRBV25-1A0A075B6N4 114 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 ADIRFQ15847 76 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 FAM74A3Q4VXF1 159 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 C15orf54Q8N8G6 183 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 TSKUQ8WUA8 353 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 OSTCQ9NRP0 149 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
BRCA1-228ENST00000618469 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 PKIAP61925 76 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
BRCA1-228ENST00000618469 ELOBQ15370 118 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 TMEM241Q24JQ0 296 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 ISOC2Q96AB3 205 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 RMI2Q96E14 147 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 NIT2Q9NQR4 276 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 NAT8Q9UHE5 227 aa10.64□□□□□ -0.71
BRCA1-228ENST00000618469 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
BRCA1-228ENST00000618469 CRPP02741 224 aa10.63□□□□□ -0.71
BRCA1-228ENST00000618469 FOXA3P55318 350 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-228ENST00000618469 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
BRCA1-228ENST00000618469 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
BRCA1-228ENST00000618469 GAGE6Q13070 117 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 IQCJQ1A5X6 159 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 Q8N814 137 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 Q8N976 141 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 V9GYV3 84 aa10.62□□□□□ -0.71
BRCA1-228ENST00000618469 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
BRCA1-228ENST00000618469 LECT2O14960 151 aa10.61□□□□□ -0.71
BRCA1-228ENST00000618469 WFDC2Q14508 124 aa10.61□□□□□ -0.71
BRCA1-228ENST00000618469 DEFB104AQ8WTQ1 72 aa10.61□□□□□ -0.71
BRCA1-228ENST00000618469 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
BRCA1-228ENST00000618469 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
BRCA1-228ENST00000618469 IGLV5-52A0A0A0MRZ9 124 aa10.6□□□□□ -0.71
BRCA1-228ENST00000618469 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
BRCA1-228ENST00000618469 ATRAIDQ6UW56 229 aa10.6□□□□□ -0.71
BRCA1-228ENST00000618469 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-228ENST00000618469 RBX1P62877 108 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 Q0VG73 95 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms