RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
ATF3-210ENST00000613104 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 M0QY20 66 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 ELOBQ15370 118 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 FAM104BQ5XKR9 115 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 YPEL4Q96NS1 127 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 STARD9Q9P2P6 4700 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 Q9UF83 564 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 ICOSQ9Y6W8 199 aa6.46□□□□□ -1.38
ATF3-210ENST00000613104 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 H7C1H1 209 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 ATP6V1G1O75348 118 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 NUDT3O95989 172 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 P0DMU3 169 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 FAM231AP0DMU4 169 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 FAM231CP0DMU5 169 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 S100A1P23297 94 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 MRPL23Q16540 153 aaKnown RBP6.45□□□□□ -1.38
ATF3-210ENST00000613104 NEXN-AS1Q8NBZ9 246 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 MRAP2Q96G30 205 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 DNAJC30Q96LL9 226 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 SMCO4Q9NRQ5 59 aa6.45□□□□□ -1.38
ATF3-210ENST00000613104 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 RPL36AP83881 106 aaKnown RBP6.44□□□□□ -1.38
ATF3-210ENST00000613104 GAGE1Q13065 139 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 GAGE4Q13068 117 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 GAGE5Q13069 117 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 COX19Q49B96 90 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
ATF3-210ENST00000613104 GAGE13Q4V321 117 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 TMEM136Q6ZRR5 245 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 RPL36ALQ969Q0 106 aaKnown RBP6.44□□□□□ -1.38
ATF3-210ENST00000613104 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
ATF3-210ENST00000613104 TGIF2-C20orf24A0A0A6YYL0 155 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 SRIP30626 198 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 UBE2D3P61077 147 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 UBE2D2P62837 147 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 CBLN2Q8IUK8 224 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 NIT2Q9NQR4 276 aa6.43□□□□□ -1.38
ATF3-210ENST00000613104 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
ATF3-210ENST00000613104 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 HLA-DQA1P01909 254 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 TIRAPP58753 221 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 ESRGQ1W209 222 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 NRACQ8N912 160 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
ATF3-210ENST00000613104 RPL39LQ96EH5 51 aaKnown RBP6.42□□□□□ -1.38
ATF3-210ENST00000613104 SMKR1H3BMG3 65 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 NCR2O95944 276 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 PPP1R17O96001 155 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 PPBPP02775 128 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 MT-ND6P03923 174 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 CKS2P33552 79 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
ATF3-210ENST00000613104 OR10J3Q5JRS4 329 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 LGALS9CQ6DKI2 356 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 DAZ4Q86SG3 579 aaKnown RBP6.41□□□□□ -1.38
ATF3-210ENST00000613104 GTSF1LQ9H1H1 148 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 DAZ3Q9NR90 486 aaKnown RBP6.41□□□□□ -1.38
ATF3-210ENST00000613104 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
ATF3-210ENST00000613104 D6R8Y8 96 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 PHOX2AO14813 284 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 SCO1O75880 301 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 APCSP02743 223 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 CCL18P55774 89 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 ORMDL3Q8N138 153 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.38
ATF3-210ENST00000613104 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 COLCA2A8K830 154 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
ATF3-210ENST00000613104 LELP1Q5T871 98 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 LINC00476Q8WZB0 136 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 UPK3BQ9BT76 320 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 LAMTOR2Q9Y2Q5 125 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
ATF3-210ENST00000613104 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
ATF3-210ENST00000613104 IGHV3-38A0A0C4DH36 116 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 NPYP01303 97 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
ATF3-210ENST00000613104 RPL32P62910 135 aaKnown RBP6.38□□□□□ -1.39
ATF3-210ENST00000613104 KIAA1644Q3SXP7 199 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 TMEM97Q5BJF2 176 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.38□□□□□ -1.39
ATF3-210ENST00000613104 PRELID3AQ96N28 172 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 TMEM70Q9BUB7 260 aa6.38□□□□□ -1.39
ATF3-210ENST00000613104 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms