RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 TPPP3Q9BW30 176 aa12.27□□□□□ -0.45
MMP28-202ENST00000612292 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
MMP28-202ENST00000612292 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
MMP28-202ENST00000612292 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
MMP28-202ENST00000612292 TM2D2Q9BX73 214 aa12.26□□□□□ -0.45
MMP28-202ENST00000612292 M0QY20 66 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 NTF3P20783 257 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 KRTAP10-1P60331 282 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 TOR2AQ5JU69 321 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 MAPKAPK5-AS1Q8N8E1 139 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 RNASE7Q9H1E1 156 aaKnown RBP12.25□□□□□ -0.45
MMP28-202ENST00000612292 ABCA13Q86UQ4 5058 aa12.25□□□□□ -0.45
MMP28-202ENST00000612292 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
MMP28-202ENST00000612292 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
MMP28-202ENST00000612292 URGCP-MRPS24S4R325 110 aa12.24□□□□□ -0.45
MMP28-202ENST00000612292 NDUFS6O75380 124 aaKnown RBP12.23□□□□□ -0.45
MMP28-202ENST00000612292 CTRLP40313 264 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 XGP55808 180 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 Q8N1X5 172 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 Q8N814 137 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
MMP28-202ENST00000612292 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
MMP28-202ENST00000612292 A0A087WX48 190 aa12.22□□□□□ -0.45
MMP28-202ENST00000612292 WFDC2Q14508 124 aa12.22□□□□□ -0.45
MMP28-202ENST00000612292 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
MMP28-202ENST00000612292 GCSHP23434 173 aa12.21□□□□□ -0.45
MMP28-202ENST00000612292 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
MMP28-202ENST00000612292 NTN5Q8WTR8 489 aaPredicted RBP12.21□□□□□ -0.45
MMP28-202ENST00000612292 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 MGPP08493 103 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 ELOBQ15370 118 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 TMEM97Q5BJF2 176 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.2□□□□□ -0.46
MMP28-202ENST00000612292 GTSF1Q8WW33 167 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 DPH3P1Q9H4G8 78 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
MMP28-202ENST00000612292 H7C1H1 209 aa12.19□□□□□ -0.46
MMP28-202ENST00000612292 EIF5A2Q9GZV4 153 aaKnown RBP12.19□□□□□ -0.46
MMP28-202ENST00000612292 IGLV5-52A0A0A0MRZ9 124 aa12.18□□□□□ -0.46
MMP28-202ENST00000612292 MPV17L2Q567V2 206 aa12.18□□□□□ -0.46
MMP28-202ENST00000612292 RASL11AQ6T310 242 aa12.18□□□□□ -0.46
MMP28-202ENST00000612292 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
MMP28-202ENST00000612292 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
MMP28-202ENST00000612292 GATCO43716 136 aaKnown RBP12.17□□□□□ -0.46
MMP28-202ENST00000612292 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
MMP28-202ENST00000612292 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
MMP28-202ENST00000612292 TWIST1Q15672 202 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 KCNIP4Q6PIL6 250 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 RMI2Q96E14 147 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
MMP28-202ENST00000612292 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
MMP28-202ENST00000612292 A8MWL6 223 aa12.16□□□□□ -0.46
MMP28-202ENST00000612292 CEBPGP53567 150 aa12.16□□□□□ -0.46
MMP28-202ENST00000612292 Q0VG73 95 aa12.16□□□□□ -0.46
MMP28-202ENST00000612292 IQCJQ1A5X6 159 aa12.16□□□□□ -0.46
MMP28-202ENST00000612292 LECT2O14960 151 aa12.15□□□□□ -0.46
MMP28-202ENST00000612292 PKIAP61925 76 aa12.15□□□□□ -0.46
MMP28-202ENST00000612292 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
MMP28-202ENST00000612292 Q8N976 141 aa12.15□□□□□ -0.46
MMP28-202ENST00000612292 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
MMP28-202ENST00000612292 TRBV25-1A0A075B6N4 114 aa12.14□□□□□ -0.47
MMP28-202ENST00000612292 CT83Q5H943 113 aa12.14□□□□□ -0.47
MMP28-202ENST00000612292 C15orf54Q8N8G6 183 aa12.14□□□□□ -0.47
MMP28-202ENST00000612292 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
MMP28-202ENST00000612292 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
MMP28-202ENST00000612292 ZNF727A8MUV8 499 aa12.13□□□□□ -0.47
MMP28-202ENST00000612292 ANGP03950 147 aaKnown RBP12.13□□□□□ -0.47
MMP28-202ENST00000612292 RBX1P62877 108 aa12.13□□□□□ -0.47
MMP28-202ENST00000612292 FRZBQ92765 325 aa12.13□□□□□ -0.47
MMP28-202ENST00000612292 PRR34Q9NV39 138 aa12.13□□□□□ -0.47
MMP28-202ENST00000612292 DNAH8Q96JB1 4490 aa12.12□□□□□ -0.47
MMP28-202ENST00000612292 GAGE6Q13070 117 aa12.12□□□□□ -0.47
MMP28-202ENST00000612292 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
MMP28-202ENST00000612292 PGLYRP4Q96LB8 373 aa12.12□□□□□ -0.47
MMP28-202ENST00000612292 TMEM70Q9BUB7 260 aa12.12□□□□□ -0.47
MMP28-202ENST00000612292 OSTCQ9NRP0 149 aa12.11□□□□□ -0.47
MMP28-202ENST00000612292 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
MMP28-202ENST00000612292 C9JQL5 133 aa12.1□□□□□ -0.47
MMP28-202ENST00000612292 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
MMP28-202ENST00000612292 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 A0A1B0GUV1 79 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 MIAQ16674 131 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 KRTAP26-1Q6PEX3 210 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 TSKUQ8WUA8 353 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 GFRA4Q9GZZ7 299 aa12.09□□□□□ -0.47
MMP28-202ENST00000612292 FAT1Q14517 4588 aa12.08□□□□□ -0.48
MMP28-202ENST00000612292 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
MMP28-202ENST00000612292 CRPP02741 224 aa12.08□□□□□ -0.48
MMP28-202ENST00000612292 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
MMP28-202ENST00000612292 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.48
MMP28-202ENST00000612292 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms