RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 LINC00612Q8N6U2 182 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 MSRB1Q9NZV6 116 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 PHLDA3Q9Y5J5 127 aa15.14■□□□□ 0.01
CBWD3-207ENST00000611426 SPANXN1Q5VSR9 72 aa15.13■□□□□ 0.01
CBWD3-207ENST00000611426 TRAV26-1A0A087WT03 109 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 MUC21A0A0G2JKD1 596 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 MUC21A0A140T8X8 626 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 PIK3CD-AS1Q5SR53 167 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 C18orf32Q8TCD1 76 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 PTH2Q96A98 100 aa15.12■□□□□ 0.01
CBWD3-207ENST00000611426 PPBPP02775 128 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 HIST3H2BBQ8N257 126 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 C6orf223Q8N319 242 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 RNF185Q96GF1 192 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 MUC4Q99102 2169 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 A0A0J9YY99 117 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 SMIM15Q7Z3B0 74 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 AMN1Q8IY45 258 aa15.11■□□□□ 0.01
CBWD3-207ENST00000611426 TNP2Q05952 138 aa15.1■□□□□ 0.01
CBWD3-207ENST00000611426 DAZ2Q13117 558 aaKnown RBP15.1■□□□□ 0.01
CBWD3-207ENST00000611426 MRPL51Q4U2R6 128 aaKnown RBP15.1■□□□□ 0.01
CBWD3-207ENST00000611426 MDFICQ9P1T7 246 aa15.1■□□□□ 0.01
CBWD3-207ENST00000611426 RAB4AP20338 218 aa15.09■□□□□ 0.01
CBWD3-207ENST00000611426 LINC00310P59036 64 aa15.09■□□□□ 0.01
CBWD3-207ENST00000611426 AP1S3Q96PC3 154 aa15.09■□□□□ 0.01
CBWD3-207ENST00000611426 Q9H8V8 135 aa15.09■□□□□ 0.01
CBWD3-207ENST00000611426 LAMTOR2Q9Y2Q5 125 aa15.09■□□□□ 0.01
CBWD3-207ENST00000611426 RYR1P21817 5038 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 IFITM10A6NMD0 228 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 EVI2AP22794 236 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 Q6ZTI0 123 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 ORMDL3Q8N138 153 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 GSN-AS1Q9NRJ2 163 aa15.08■□□□□ 0
CBWD3-207ENST00000611426 M0R381 172 aa15.07■□□□□ 0
CBWD3-207ENST00000611426 ZNF415Q09FC8 603 aa15.07■□□□□ 0
CBWD3-207ENST00000611426 C11orf72Q8NBR9 251 aa15.07■□□□□ 0
CBWD3-207ENST00000611426 SYT8Q8NBV8 401 aa15.07■□□□□ 0
CBWD3-207ENST00000611426 PACRGQ96M98 296 aaPredicted RBP15.07■□□□□ 0
CBWD3-207ENST00000611426 H3BNG1 76 aa15.06■□□□□ 0
CBWD3-207ENST00000611426 BAGE3Q86Y29 109 aa15.06■□□□□ 0
CBWD3-207ENST00000611426 SPXQ9BT56 116 aa15.06■□□□□ 0
CBWD3-207ENST00000611426 DPH3P1Q9H4G8 78 aa15.06■□□□□ 0
CBWD3-207ENST00000611426 KIF25-AS1Q9Y6Z4 181 aa15.06■□□□□ 0
CBWD3-207ENST00000611426 TRGV2A0A075B6R0 118 aa15.05■□□□□ -0
CBWD3-207ENST00000611426 SERF1AO75920 110 aa15.05■□□□□ -0
CBWD3-207ENST00000611426 SSTP61278 116 aa15.05■□□□□ -0
CBWD3-207ENST00000611426 ESRGQ1W209 222 aa15.05■□□□□ -0
CBWD3-207ENST00000611426 MRAP2Q96G30 205 aa15.05■□□□□ -0
CBWD3-207ENST00000611426 D6R8Y8 96 aa15.04■□□□□ -0
CBWD3-207ENST00000611426 TRGV1A0A0A0MS02 117 aa15.03■□□□□ -0
CBWD3-207ENST00000611426 LINC00315P59091 139 aa15.03■□□□□ -0
CBWD3-207ENST00000611426 PRELID3AQ96N28 172 aa15.03■□□□□ -0
CBWD3-207ENST00000611426 M0R2P5 195 aa15.02■□□□□ -0
CBWD3-207ENST00000611426 CKS2P33552 79 aa15.02■□□□□ -0
CBWD3-207ENST00000611426 C18orf15Q96N68 181 aa15.02■□□□□ -0
CBWD3-207ENST00000611426 HIST1H2BLQ99880 126 aa15.02■□□□□ -0
CBWD3-207ENST00000611426 UPK3BQ9BT76 320 aa15.02■□□□□ -0
CBWD3-207ENST00000611426 PRSS47A8MTI9 375 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 C16orf90A8MZG2 172 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 NUPR1O60356 82 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 S100A2P29034 98 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 IQCJQ1A5X6 159 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 TTC32Q5I0X7 151 aa15.01□□□□□ -0.01
CBWD3-207ENST00000611426 CHCHD1Q96BP2 118 aaKnown RBP15.01□□□□□ -0.01
CBWD3-207ENST00000611426 TMEM18Q96B42 140 aa15□□□□□ -0.01
CBWD3-207ENST00000611426 VSIG2Q96IQ7 327 aa15□□□□□ -0.01
CBWD3-207ENST00000611426 MRPS16Q9Y3D3 137 aaKnown RBP15□□□□□ -0.01
CBWD3-207ENST00000611426 ZNF876PQ49A33 203 aa14.99□□□□□ -0.01
CBWD3-207ENST00000611426 C14orf178Q8N769 122 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-207ENST00000611426 URB1-AS1Q96HZ7 61 aa14.99□□□□□ -0.01
CBWD3-207ENST00000611426 KRTAP1-5Q9BYS1 174 aa14.99□□□□□ -0.01
CBWD3-207ENST00000611426 ABCA13Q86UQ4 5058 aa14.99□□□□□ -0.01
CBWD3-207ENST00000611426 NRACQ8N912 160 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 A0A096LPF7 62 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 PPP1R17O96001 155 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 NPYP01303 97 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 CRYGDP07320 174 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 SMIM17P0DL12 118 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 RASL10AQ92737 203 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 LRP1BQ9NZR2 4599 aa14.98□□□□□ -0.01
CBWD3-207ENST00000611426 LINC01546A6NGU7 62 aa14.97□□□□□ -0.01
CBWD3-207ENST00000611426 A8MWV9 139 aa14.97□□□□□ -0.01
CBWD3-207ENST00000611426 TNFRSF6BO95407 300 aa14.97□□□□□ -0.01
CBWD3-207ENST00000611426 PDZD11Q5EBL8 140 aa14.97□□□□□ -0.01
CBWD3-207ENST00000611426 NIT1Q86X76 327 aa14.97□□□□□ -0.01
CBWD3-207ENST00000611426 HSPG2P98160 4391 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 SMKR1H3BMG3 65 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 NCR2O95944 276 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 LINC00614P0C842 121 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 FABP4P15090 132 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 PMCHP20382 165 aa14.96□□□□□ -0.02
CBWD3-207ENST00000611426 IGHV3-53P01767 116 aa14.95□□□□□ -0.02
CBWD3-207ENST00000611426 UFSP1Q6NVU6 142 aa14.95□□□□□ -0.02
CBWD3-207ENST00000611426 MAP1LC3AQ9H492 121 aa14.95□□□□□ -0.02
CBWD3-207ENST00000611426 JPT2Q9H910 190 aa14.95□□□□□ -0.02
CBWD3-207ENST00000611426 MRPL16Q9NX20 251 aaKnown RBP14.95□□□□□ -0.02
CBWD3-207ENST00000611426 PAX4O43316 350 aa14.94□□□□□ -0.02
CBWD3-207ENST00000611426 GAS8-AS1O95177 125 aa14.94□□□□□ -0.02
CBWD3-207ENST00000611426 AKR1D1P51857 326 aa14.94□□□□□ -0.02
CBWD3-207ENST00000611426 RPL32P62910 135 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms