RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
TCF3-219ENST00000610756 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
TCF3-219ENST00000610756 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
TCF3-219ENST00000610756 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
TCF3-219ENST00000610756 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.88□□□□□ -0.35
TCF3-219ENST00000610756 CHCHD7Q9BUK0 85 aa12.88□□□□□ -0.35
TCF3-219ENST00000610756 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
TCF3-219ENST00000610756 APOBP04114 4563 aaKnown RBP12.87□□□□□ -0.35
TCF3-219ENST00000610756 NTF3P20783 257 aa12.87□□□□□ -0.35
TCF3-219ENST00000610756 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
TCF3-219ENST00000610756 A0A087WX48 190 aa12.86□□□□□ -0.35
TCF3-219ENST00000610756 M0QY20 66 aa12.86□□□□□ -0.35
TCF3-219ENST00000610756 FUSP35637 526 aaKnown RBP eCLIP12.86□□□□□ -0.35
TCF3-219ENST00000610756 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
TCF3-219ENST00000610756 EIF5A2Q9GZV4 153 aaKnown RBP12.86□□□□□ -0.35
TCF3-219ENST00000610756 H7C1H1 209 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 CTRLP40313 264 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 ELOBQ15370 118 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 TMEM97Q5BJF2 176 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 DNAJC30Q96LL9 226 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 FAM210AQ96ND0 272 aa12.85□□□□□ -0.35
TCF3-219ENST00000610756 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
TCF3-219ENST00000610756 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
TCF3-219ENST00000610756 KRTAP17-1Q9BYP8 105 aa12.84□□□□□ -0.35
TCF3-219ENST00000610756 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
TCF3-219ENST00000610756 TMEM262E9PQX1 116 aa12.83□□□□□ -0.36
TCF3-219ENST00000610756 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
TCF3-219ENST00000610756 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
TCF3-219ENST00000610756 KLK12Q9UKR0 248 aa12.83□□□□□ -0.36
TCF3-219ENST00000610756 MGPP08493 103 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 CEBPGP53567 150 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 TWIST1Q15672 202 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 NTM-AS1Q6ZSK4 140 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 Q8N814 137 aa12.82□□□□□ -0.36
TCF3-219ENST00000610756 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
TCF3-219ENST00000610756 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
TCF3-219ENST00000610756 GTSF1Q8WW33 167 aa12.81□□□□□ -0.36
TCF3-219ENST00000610756 RMI2Q96E14 147 aa12.81□□□□□ -0.36
TCF3-219ENST00000610756 A8MWL6 223 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
TCF3-219ENST00000610756 GCSHP23434 173 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
TCF3-219ENST00000610756 PKIAP61925 76 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 RASL11AQ6T310 242 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 NIT2Q9NQR4 276 aa12.8□□□□□ -0.36
TCF3-219ENST00000610756 KRTAP10-1P60331 282 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 Q0VG73 95 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 CT83Q5H943 113 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 ATRAIDQ6UW56 229 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 UBE2WQ96B02 151 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 CHCHD5Q9BSY4 110 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 KRTAP4-5Q9BYR2 181 aa12.79□□□□□ -0.36
TCF3-219ENST00000610756 IGLV5-52A0A0A0MRZ9 124 aa12.78□□□□□ -0.36
TCF3-219ENST00000610756 TEX261Q6UWH6 196 aa12.78□□□□□ -0.36
TCF3-219ENST00000610756 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
TCF3-219ENST00000610756 Q8N1X5 172 aa12.78□□□□□ -0.36
TCF3-219ENST00000610756 FRZBQ92765 325 aa12.78□□□□□ -0.36
TCF3-219ENST00000610756 TRBV25-1A0A075B6N4 114 aa12.77□□□□□ -0.37
TCF3-219ENST00000610756 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
TCF3-219ENST00000610756 IQCJQ1A5X6 159 aa12.77□□□□□ -0.37
TCF3-219ENST00000610756 MPV17L2Q567V2 206 aa12.77□□□□□ -0.37
TCF3-219ENST00000610756 ABCA13Q86UQ4 5058 aa12.77□□□□□ -0.37
TCF3-219ENST00000610756 IGKV2D-24A0A075B6R9 120 aa12.76□□□□□ -0.37
TCF3-219ENST00000610756 XGP55808 180 aa12.76□□□□□ -0.37
TCF3-219ENST00000610756 WFDC2Q14508 124 aa12.76□□□□□ -0.37
TCF3-219ENST00000610756 ENHOQ6UWT2 76 aa12.76□□□□□ -0.37
TCF3-219ENST00000610756 IGHV1-24A0A0C4DH33 117 aa12.75□□□□□ -0.37
TCF3-219ENST00000610756 SMIM15Q7Z3B0 74 aa12.75□□□□□ -0.37
TCF3-219ENST00000610756 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 FAM74A3Q4VXF1 159 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 C15orf54Q8N8G6 183 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 Q8N976 141 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 GATD1Q8NB37 220 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 PGLYRP4Q96LB8 373 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
TCF3-219ENST00000610756 ANGP03950 147 aaKnown RBP12.73□□□□□ -0.37
TCF3-219ENST00000610756 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
TCF3-219ENST00000610756 LECT2O14960 151 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 RBX1P62877 108 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 GAGE6Q13070 117 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 TMEM241Q24JQ0 296 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 PRR34Q9NV39 138 aa12.72□□□□□ -0.37
TCF3-219ENST00000610756 CRPP02741 224 aa12.71□□□□□ -0.37
TCF3-219ENST00000610756 C1orf43Q9BWL3 253 aa12.71□□□□□ -0.37
TCF3-219ENST00000610756 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 C9JQL5 133 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 PEA15Q15121 130 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 MIAQ16674 131 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 BORCS7Q96B45 105 aa12.7□□□□□ -0.38
TCF3-219ENST00000610756 A0A1B0GUT8 65 aa12.69□□□□□ -0.38
TCF3-219ENST00000610756 A0A1B0GUV1 79 aa12.69□□□□□ -0.38
TCF3-219ENST00000610756 TMEM243Q9BU79 118 aa12.69□□□□□ -0.38
TCF3-219ENST00000610756 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms