RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
CTSA-219ENST00000607841 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
CTSA-219ENST00000607841 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
CTSA-219ENST00000607841 NBDYA0A0U1RRE5 68 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 M0R2N4 97 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 UBE2D3P61077 147 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 UBE2D2P62837 147 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 TTC32Q5I0X7 151 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 OR10J3Q5JRS4 329 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 FRZBQ92765 325 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 KMT2AQ03164 3969 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
CTSA-219ENST00000607841 TRAV9-2A0A087WT02 112 aa9.77□□□□□ -0.85
CTSA-219ENST00000607841 S100A8P05109 93 aa9.77□□□□□ -0.85
CTSA-219ENST00000607841 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
CTSA-219ENST00000607841 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
CTSA-219ENST00000607841 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
CTSA-219ENST00000607841 K7EP13 123 aa9.76□□□□□ -0.85
CTSA-219ENST00000607841 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
CTSA-219ENST00000607841 C10orf91Q5T1B1 145 aa9.76□□□□□ -0.85
CTSA-219ENST00000607841 Q6ZR54 194 aa9.76□□□□□ -0.85
CTSA-219ENST00000607841 CTDSP1Q9GZU7 261 aa9.76□□□□□ -0.85
CTSA-219ENST00000607841 IGHV3-38A0A0C4DH36 116 aa9.75□□□□□ -0.85
CTSA-219ENST00000607841 CAMPP49913 170 aa9.75□□□□□ -0.85
CTSA-219ENST00000607841 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
CTSA-219ENST00000607841 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
CTSA-219ENST00000607841 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
CTSA-219ENST00000607841 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
CTSA-219ENST00000607841 DNAH6Q9C0G6 4158 aa9.74□□□□□ -0.85
CTSA-219ENST00000607841 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
CTSA-219ENST00000607841 HBBP68871 147 aa9.74□□□□□ -0.85
CTSA-219ENST00000607841 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
CTSA-219ENST00000607841 MRPL54Q6P161 138 aaKnown RBP9.74□□□□□ -0.85
CTSA-219ENST00000607841 IMMP2LQ96T52 175 aa9.74□□□□□ -0.85
CTSA-219ENST00000607841 TRAV26-2A0A0B4J265 109 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
CTSA-219ENST00000607841 RAB4AP20338 218 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 MRAP2Q96G30 205 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
CTSA-219ENST00000607841 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
CTSA-219ENST00000607841 LINC01556Q5JQF7 62 aa9.72□□□□□ -0.85
CTSA-219ENST00000607841 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
CTSA-219ENST00000607841 RNF185Q96GF1 192 aa9.72□□□□□ -0.85
CTSA-219ENST00000607841 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
CTSA-219ENST00000607841 A0A1B0GXF2 115 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 PPP1R17O96001 155 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 RHEBQ15382 184 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.86
CTSA-219ENST00000607841 C7orf77A4D0Y5 90 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 APOC3P02656 99 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 S100PP25815 95 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 PKIAP61925 76 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 SVBPQ8N300 66 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 C6orf223Q8N319 242 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 RPL39LQ96EH5 51 aaKnown RBP9.7□□□□□ -0.86
CTSA-219ENST00000607841 DNAH10Q8IVF4 4471 aa9.7□□□□□ -0.86
CTSA-219ENST00000607841 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
CTSA-219ENST00000607841 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
CTSA-219ENST00000607841 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
CTSA-219ENST00000607841 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
CTSA-219ENST00000607841 RPS10P5Q9NQ39 176 aa9.69□□□□□ -0.86
CTSA-219ENST00000607841 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 A0A087WX48 190 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 IGHV1-24A0A0C4DH33 117 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 TMEM262E9PQX1 116 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 SNAPINO95295 136 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 IGHV3-30P01768 117 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 IGHV3-30-5P0DP03 117 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 CKS2P33552 79 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 COTL1Q14019 142 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
CTSA-219ENST00000607841 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
CTSA-219ENST00000607841 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
CTSA-219ENST00000607841 IQCJQ1A5X6 159 aa9.67□□□□□ -0.86
CTSA-219ENST00000607841 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
CTSA-219ENST00000607841 NTM-AS1Q6ZSK4 140 aa9.67□□□□□ -0.86
CTSA-219ENST00000607841 NFE4Q86UQ8 179 aa9.67□□□□□ -0.86
CTSA-219ENST00000607841 NIT1Q86X76 327 aa9.67□□□□□ -0.86
CTSA-219ENST00000607841 I3L3M4 83 aa9.66□□□□□ -0.86
CTSA-219ENST00000607841 NCR2O95944 276 aa9.66□□□□□ -0.86
CTSA-219ENST00000607841 PPBPP02775 128 aa9.66□□□□□ -0.86
CTSA-219ENST00000607841 PMCHP20382 165 aa9.66□□□□□ -0.86
CTSA-219ENST00000607841 ELOBQ15370 118 aa9.66□□□□□ -0.86
CTSA-219ENST00000607841 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
CTSA-219ENST00000607841 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
CTSA-219ENST00000607841 RTL8CO15255 209 aa9.65□□□□□ -0.86
CTSA-219ENST00000607841 GAS8-AS1O95177 125 aa9.65□□□□□ -0.86
CTSA-219ENST00000607841 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.86
CTSA-219ENST00000607841 TMEM243Q9BU79 118 aa9.65□□□□□ -0.86
CTSA-219ENST00000607841 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms