RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 DAZ4Q86SG3 579 aaKnown RBP9.11□□□□□ -0.95
CTSA-218ENST00000607814 DNAJC30Q96LL9 226 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
CTSA-218ENST00000607814 KIF25-AS1Q9Y6Z4 181 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 IBA57-AS1B1ANH7 110 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 K7EP13 123 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 RAB4BP61018 213 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 LYPD6BQ8NI32 183 aa9.1□□□□□ -0.95
CTSA-218ENST00000607814 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
CTSA-218ENST00000607814 MGPP08493 103 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 RPS20P60866 119 aaKnown RBP9.09□□□□□ -0.95
CTSA-218ENST00000607814 UBE2D3P61077 147 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 UBE2D2P62837 147 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 RPL36AP83881 106 aaKnown RBP9.09□□□□□ -0.95
CTSA-218ENST00000607814 C10orf126Q8N4M7 172 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 DEFB104AQ8WTQ1 72 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 RPL36ALQ969Q0 106 aaKnown RBP9.09□□□□□ -0.95
CTSA-218ENST00000607814 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
CTSA-218ENST00000607814 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
CTSA-218ENST00000607814 TRBV7-3A0A075B6L6 115 aa9.08□□□□□ -0.96
CTSA-218ENST00000607814 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
CTSA-218ENST00000607814 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
CTSA-218ENST00000607814 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 LINC00862A6NCI5 91 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 PSCAO43653 123 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 NTF3P20783 257 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 SMIM12Q96EX1 92 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 AP1S3Q96PC3 154 aa9.07□□□□□ -0.96
CTSA-218ENST00000607814 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
CTSA-218ENST00000607814 NIT1Q86X76 327 aa9.06□□□□□ -0.96
CTSA-218ENST00000607814 OR10G8Q8NGN5 311 aa9.06□□□□□ -0.96
CTSA-218ENST00000607814 RPP21Q9H633 154 aaKnown RBP9.06□□□□□ -0.96
CTSA-218ENST00000607814 KLK12Q9UKR0 248 aa9.06□□□□□ -0.96
CTSA-218ENST00000607814 DNAH8Q96JB1 4490 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 A0A087WWC5 75 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 TMEM262E9PQX1 116 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 TMEM250H0YL14 139 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 CACNG7P62955 275 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 WFDC2Q14508 124 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 FAM210AQ96ND0 272 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 BIN3Q9NQY0 253 aa9.05□□□□□ -0.96
CTSA-218ENST00000607814 C9JQL5 133 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 M0QY20 66 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 LECT2O14960 151 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
CTSA-218ENST00000607814 SRP19P09132 144 aaKnown RBP9.04□□□□□ -0.96
CTSA-218ENST00000607814 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
CTSA-218ENST00000607814 TWIST1Q15672 202 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 NTN5Q8WTR8 489 aaPredicted RBP9.04□□□□□ -0.96
CTSA-218ENST00000607814 URGCP-MRPS24S4R325 110 aa9.04□□□□□ -0.96
CTSA-218ENST00000607814 TRBV6-8A0A0A6YYG3 113 aa9.03□□□□□ -0.96
CTSA-218ENST00000607814 F2Z2F3 143 aa9.03□□□□□ -0.96
CTSA-218ENST00000607814 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
CTSA-218ENST00000607814 PGLYRP4Q96LB8 373 aa9.03□□□□□ -0.96
CTSA-218ENST00000607814 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
CTSA-218ENST00000607814 A0A087WX48 190 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
CTSA-218ENST00000607814 CTRLP40313 264 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 UBE2WQ96B02 151 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 CHCHD5Q9BSY4 110 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
CTSA-218ENST00000607814 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 HAMPP81172 84 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 GAGE6Q13070 117 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 MPV17L2Q567V2 206 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 Q8N976 141 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
CTSA-218ENST00000607814 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
CTSA-218ENST00000607814 TRGC1P0CF51 173 aa9□□□□□ -0.97
CTSA-218ENST00000607814 LAGE3Q14657 143 aa9□□□□□ -0.97
CTSA-218ENST00000607814 COMMD7Q86VX2 200 aa9□□□□□ -0.97
CTSA-218ENST00000607814 TRAV8-3A0A0A6YYJ7 113 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 PEA15Q15121 130 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 KCNIP4Q6PIL6 250 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 CLPSL2Q6UWE3 100 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 FAM231DQ6ZW35 169 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 Q8N814 137 aa8.99□□□□□ -0.97
CTSA-218ENST00000607814 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
CTSA-218ENST00000607814 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
CTSA-218ENST00000607814 ANGP03950 147 aaKnown RBP8.98□□□□□ -0.97
CTSA-218ENST00000607814 WDR73Q6P4I2 378 aa8.98□□□□□ -0.97
CTSA-218ENST00000607814 GATD1Q8NB37 220 aa8.98□□□□□ -0.97
CTSA-218ENST00000607814 RPL39LQ96EH5 51 aaKnown RBP8.98□□□□□ -0.97
CTSA-218ENST00000607814 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms