RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SPEF2Q9C093 1822 aa-0.38□□□□□ -2.47
RNU6-88P-201ENST00000606801 ARHGEF10O15013 1369 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 IBTKQ9P2D0 1353 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 ARPC5O15511 151 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 TSPAN19P0C672 248 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 INSL4Q14641 139 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 MMGT1Q8N4V1 131 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 KMT2AQ03164 3969 aa-0.39□□□□□ -2.47
RNU6-88P-201ENST00000606801 TENM4Q6N022 2769 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 UBE2D1P51668 147 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 EDDM3BP56851 147 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 CKS1BP61024 79 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 DR1Q01658 176 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 C9orf116Q5BN46 136 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 SPANXN1Q5VSR9 72 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 PYDC1Q8WXC3 89 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 SMIM3Q9BZL3 60 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 SAR1AQ9NR31 198 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 BIVM-ERCC5R4GMW8 1640 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 DISP2A7MBM2 1401 aa-0.4□□□□□ -2.47
RNU6-88P-201ENST00000606801 CHD6Q8TD26 2715 aa-0.41□□□□□ -2.47
RNU6-88P-201ENST00000606801 ZMYM4Q5VZL5 1548 aa-0.41□□□□□ -2.48
RNU6-88P-201ENST00000606801 Q6ZUT4 128 aa-0.41□□□□□ -2.48
RNU6-88P-201ENST00000606801 WNK3Q9BYP7 1800 aa-0.42□□□□□ -2.48
RNU6-88P-201ENST00000606801 GCHFRP30047 84 aa-0.42□□□□□ -2.48
RNU6-88P-201ENST00000606801 WFDC6Q9BQY6 131 aa-0.42□□□□□ -2.48
RNU6-88P-201ENST00000606801 PRDM2Q13029 1718 aa-0.42□□□□□ -2.48
RNU6-88P-201ENST00000606801 NWD2Q9ULI1 1742 aa-0.42□□□□□ -2.48
RNU6-88P-201ENST00000606801 MYCBP2O75592 4640 aa-0.43□□□□□ -2.48
RNU6-88P-201ENST00000606801 UBE2G1P62253 170 aa-0.43□□□□□ -2.48
RNU6-88P-201ENST00000606801 SSBP3-AS1Q7Z2R9 100 aa-0.43□□□□□ -2.48
RNU6-88P-201ENST00000606801 GSKIPQ9P0R6 139 aa-0.43□□□□□ -2.48
RNU6-88P-201ENST00000606801 TMEM2Q9UHN6 1383 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 FHAD1B1AJZ9 1412 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 ZNF815PA8K554 130 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 CTAGE3PQ8IX95 158 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 BATF3Q9NR55 127 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 USF3Q68DE3 2245 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 DOCK1Q14185 1865 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 PI4KAP42356 2102 aa-0.44□□□□□ -2.48
RNU6-88P-201ENST00000606801 TRAV1-2A0A0B4J238 106 aa-0.45□□□□□ -2.48
RNU6-88P-201ENST00000606801 NCR2O95944 276 aa-0.45□□□□□ -2.48
RNU6-88P-201ENST00000606801 RPRMQ9NS64 109 aa-0.45□□□□□ -2.48
RNU6-88P-201ENST00000606801 GVINP1Q7Z2Y8 2422 aa-0.45□□□□□ -2.48
RNU6-88P-201ENST00000606801 LRRC37A3O60309 1634 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 HSPG2P98160 4391 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 KDM3BQ7LBC6 1761 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 UBE2DNLQ8IWF7 75 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 SCP2D1Q9UJQ7 156 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 VWFP04275 2813 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 PATJQ8NI35 1801 aa-0.46□□□□□ -2.48
RNU6-88P-201ENST00000606801 CYP4F30PQ9H0H9 118 aa-0.47□□□□□ -2.48
RNU6-88P-201ENST00000606801 DAPK1P53355 1430 aa-0.47□□□□□ -2.49
RNU6-88P-201ENST00000606801 PKD1L1Q8TDX9 2849 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 NHSL1Q5SYE7 1610 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 TRBV10-3A0A0K0K1G6 114 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 NPFFO15130 113 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 IL5P05113 134 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 IFITM1P13164 125 aa-0.48□□□□□ -2.49
RNU6-88P-201ENST00000606801 LAMC1P11047 1609 aa-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 DOCK2Q92608 1830 aa-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 ZNF236Q9UL36 1845 aa-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 M0R2Z0 102 aa-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 Q5VV11 94 aa-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 FLNAP21333 2647 aaKnown RBP-0.49□□□□□ -2.49
RNU6-88P-201ENST00000606801 LPAP08519 4548 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 CSPG4Q6UVK1 2322 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 MAP1BP46821 2468 aaKnown RBP-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 APOC4-APOC2K7ER74 178 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 IFNA17P01571 189 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 RPL7L1Q6DKI1 246 aaKnown RBP-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 SPTSSBQ8NFR3 76 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 PSMG3Q9BT73 122 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 TNXBP22105 4242 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 CASKIN1Q8WXD9 1431 aa-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 MACF1Q9UPN3 7388 aaKnown RBP-0.5□□□□□ -2.49
RNU6-88P-201ENST00000606801 C10orf142B7Z368 130 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 J3QR89 54 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 K7ERU9 68 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 S100A7L2Q5SY68 101 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 MYOM3Q5VTT5 1437 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 PPRC1Q5VV67 1664 aaKnown RBP-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 MYO7BQ6PIF6 2116 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 ZNF818PQ6ZRF7 136 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 TSTD1Q8NFU3 115 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 CNFNQ9BYD5 112 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 STAB1Q9NY15 2570 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 PRO0255Q9UI72 69 aa-0.51□□□□□ -2.49
RNU6-88P-201ENST00000606801 MYH7P12883 1935 aa-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 PIPP12273 146 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 CBLN1P23435 193 aa-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 RRAS2P62070 204 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 SDF2Q99470 211 aa-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 LRP2P98164 4655 aa-0.52□□□□□ -2.49
RNU6-88P-201ENST00000606801 LOC105371267A0A1B0GV96 52 aa-0.53□□□□□ -2.49
RNU6-88P-201ENST00000606801 A6NIN4 97 aa-0.53□□□□□ -2.49
RNU6-88P-201ENST00000606801 SMIM21Q3B7S5 101 aa-0.53□□□□□ -2.49
RNU6-88P-201ENST00000606801 SCIMPQ6UWF3 145 aa-0.53□□□□□ -2.49
RNU6-88P-201ENST00000606801 LZICQ8WZA0 190 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms