RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 MYCBP2O75592 4640 aa-0.31□□□□□ -2.46
SNORA28-201ENST00000606769 TRAV1-2A0A0B4J238 106 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 PRM1P04553 51 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 GCHFRP30047 84 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 NCS1P62166 190 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 SPANXN1Q5VSR9 72 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 AKAP14Q86UN6 197 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 SMIM3Q9BZL3 60 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 BATF3Q9NR55 127 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 SPANXCQ9NY87 97 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 PARP14Q460N5 1801 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 DISP2A7MBM2 1401 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 TNXBP22105 4242 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 PTPRQQ9UMZ3 2332 aa-0.32□□□□□ -2.46
SNORA28-201ENST00000606769 IFT172Q9UG01 1749 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 LPAP08519 4548 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 LOC105371267A0A1B0GV96 52 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 SPRR2DP22532 72 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 Q5VV11 94 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 UBE2DNLQ8IWF7 75 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 CTAGE3PQ8IX95 158 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 MMGT1Q8N4V1 131 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 SDF2Q99470 211 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 CNFNQ9BYD5 112 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 SAR1AQ9NR31 198 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 SPANXA1Q9NS26 97 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 ANKRD17O75179 2603 aaKnown RBP-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 MYH6P13533 1939 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 SPTBN2O15020 2390 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 KMT2AQ03164 3969 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 TMEM2Q9UHN6 1383 aa-0.33□□□□□ -2.46
SNORA28-201ENST00000606769 FAM208BQ5VWN6 2430 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 TRBV10-3A0A0K0K1G6 114 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 FHAD1B1AJZ9 1412 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 NPFFO15130 113 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 CEP152O94986 1710 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 NCR2O95944 276 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 DR1Q01658 176 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 AKAP6Q13023 2319 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 GSKIPQ9P0R6 139 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 ZNF292O60281 2723 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 STAB1Q9NY15 2570 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 C2CD3Q4AC94 2353 aa-0.34□□□□□ -2.46
SNORA28-201ENST00000606769 CASKIN1Q8WXD9 1431 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 C10orf142B7Z368 130 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 IFITM1P13164 125 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 RRAS2P62070 204 aaPredicted RBP-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 S100A7L2Q5SY68 101 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 SPTSSBQ8NFR3 76 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 PYDC1Q8WXC3 89 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 RPRMQ9NS64 109 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 PRO0255Q9UI72 69 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 LINC00312Q9Y6C7 94 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 NHSL1Q5SYE7 1610 aa-0.35□□□□□ -2.47
SNORA28-201ENST00000606769 PPRC1Q5VV67 1664 aaKnown RBP-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 IL5P05113 134 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 CCL18P55774 89 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 WFDC2Q14508 124 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 ZNF818PQ6ZRF7 136 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 CHD6Q8TD26 2715 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 LRRC37A3O60309 1634 aa-0.36□□□□□ -2.47
SNORA28-201ENST00000606769 VWFP04275 2813 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 ALMS1Q8TCU4 4167 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 DAPK1P53355 1430 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 MUC2Q02817 5179 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 PRDM2Q13029 1718 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 APOC4-APOC2K7ER74 178 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 M0R2Z0 102 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 BCE1O60756 84 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 SPINK8P0C7L1 97 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 CBLN1P23435 193 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 RPS25P62851 125 aaKnown RBP-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 CCL8P80075 99 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 HAMPP81172 84 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 ALX1Q15699 326 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 SMIM21Q3B7S5 101 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 TSTD1Q8NFU3 115 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 DPH3Q96FX2 82 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 AGPAT4-IT1Q9H0P7 198 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 SCP2D1Q9UJQ7 156 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 PLXNB2O15031 1838 aa-0.37□□□□□ -2.47
SNORA28-201ENST00000606769 LRP6O75581 1613 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 ZNF236Q9UL36 1845 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 PKD1L1Q8TDX9 2849 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 SPAARA0A1B0GVQ0 90 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 I3L2K1 104 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 K7ERU9 68 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 M0R3E3 92 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 NDUFB6O95139 128 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 IFNA17P01571 189 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 SPRR1AP35321 89 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 DEFB109BQ30KR1 87 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 Q5VSD8 79 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 CFAP126Q5VTH2 177 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 SCIMPQ6UWF3 145 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 BAGE3Q86Y29 109 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 ANP32BQ92688 251 aaKnown RBP-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 LSM10Q969L4 123 aaKnown RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms