RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
NECAB3-220ENST00000606699 KRTAP29-1A8MX34 341 aaPredicted RBP12.38□□□□□ -0.43
NECAB3-220ENST00000606699 PLA2G1BP04054 148 aaKnown RBP12.38□□□□□ -0.43
NECAB3-220ENST00000606699 RHOHQ15669 191 aa12.38□□□□□ -0.43
NECAB3-220ENST00000606699 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
NECAB3-220ENST00000606699 LYZL1Q6UWQ5 148 aa12.38□□□□□ -0.43
NECAB3-220ENST00000606699 Q8N814 137 aa12.38□□□□□ -0.43
NECAB3-220ENST00000606699 IBA57-AS1B1ANH7 110 aa12.37□□□□□ -0.43
NECAB3-220ENST00000606699 RHODO00212 210 aa12.37□□□□□ -0.43
NECAB3-220ENST00000606699 RPL23P62829 140 aaKnown RBP12.37□□□□□ -0.43
NECAB3-220ENST00000606699 LINC01556Q5JQF7 62 aa12.37□□□□□ -0.43
NECAB3-220ENST00000606699 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
NECAB3-220ENST00000606699 NAT8Q9UHE5 227 aa12.37□□□□□ -0.43
NECAB3-220ENST00000606699 ADIRFQ15847 76 aa12.36□□□□□ -0.43
NECAB3-220ENST00000606699 C14orf178Q8N769 122 aaPredicted RBP12.36□□□□□ -0.43
NECAB3-220ENST00000606699 FAM30AQ9NZY2 134 aa12.36□□□□□ -0.43
NECAB3-220ENST00000606699 F2Z2F3 143 aa12.35□□□□□ -0.43
NECAB3-220ENST00000606699 CTRLP40313 264 aa12.35□□□□□ -0.43
NECAB3-220ENST00000606699 CACNG7P62955 275 aa12.35□□□□□ -0.43
NECAB3-220ENST00000606699 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
NECAB3-220ENST00000606699 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
NECAB3-220ENST00000606699 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
NECAB3-220ENST00000606699 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
NECAB3-220ENST00000606699 OSTCQ9NRP0 149 aa12.34□□□□□ -0.43
NECAB3-220ENST00000606699 Q9UF83 564 aa12.34□□□□□ -0.43
NECAB3-220ENST00000606699 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 A8MWL6 223 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 GAGE1Q13065 139 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 GAGE4Q13068 117 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 GAGE5Q13069 117 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 ZNF56Q15929 161 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 CT83Q5H943 113 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 SERTAD4-AS1Q5TG53 156 aa12.33□□□□□ -0.44
NECAB3-220ENST00000606699 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
NECAB3-220ENST00000606699 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
NECAB3-220ENST00000606699 NTF3P20783 257 aa12.32□□□□□ -0.44
NECAB3-220ENST00000606699 C15orf54Q8N8G6 183 aa12.32□□□□□ -0.44
NECAB3-220ENST00000606699 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
NECAB3-220ENST00000606699 Q6ZSA8 131 aa12.31□□□□□ -0.44
NECAB3-220ENST00000606699 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
NECAB3-220ENST00000606699 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
NECAB3-220ENST00000606699 V9GYV3 84 aa12.31□□□□□ -0.44
NECAB3-220ENST00000606699 F5H697 171 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 MGPP08493 103 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 RAB4BP61018 213 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 TWIST1Q15672 202 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 TSKUQ8WUA8 353 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 TM2D2Q9BX73 214 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
NECAB3-220ENST00000606699 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 LAGE3Q14657 143 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 Q9HAA7 133 aa12.29□□□□□ -0.44
NECAB3-220ENST00000606699 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
NECAB3-220ENST00000606699 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
NECAB3-220ENST00000606699 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
NECAB3-220ENST00000606699 FOXA3P55318 350 aaPredicted RBP12.27□□□□□ -0.45
NECAB3-220ENST00000606699 LELP1Q5T871 98 aa12.27□□□□□ -0.45
NECAB3-220ENST00000606699 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
NECAB3-220ENST00000606699 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
NECAB3-220ENST00000606699 COMMD7Q86VX2 200 aa12.26□□□□□ -0.45
NECAB3-220ENST00000606699 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
NECAB3-220ENST00000606699 DPH3P1Q9H4G8 78 aa12.26□□□□□ -0.45
NECAB3-220ENST00000606699 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
NECAB3-220ENST00000606699 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
NECAB3-220ENST00000606699 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
NECAB3-220ENST00000606699 UQCC3Q6UW78 93 aa12.25□□□□□ -0.45
NECAB3-220ENST00000606699 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
NECAB3-220ENST00000606699 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
NECAB3-220ENST00000606699 BORCS7Q96B45 105 aa12.25□□□□□ -0.45
NECAB3-220ENST00000606699 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
NECAB3-220ENST00000606699 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
NECAB3-220ENST00000606699 IGHV3-30-3P0DP02 117 aa12.24□□□□□ -0.45
NECAB3-220ENST00000606699 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
NECAB3-220ENST00000606699 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
NECAB3-220ENST00000606699 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
NECAB3-220ENST00000606699 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
NECAB3-220ENST00000606699 ADCYAP1P18509 176 aa12.23□□□□□ -0.45
NECAB3-220ENST00000606699 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 M0QY20 66 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 OXTP01178 125 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 UBE2D3P61077 147 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 UBE2D2P62837 147 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
NECAB3-220ENST00000606699 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
NECAB3-220ENST00000606699 HMCN2Q8NDA2 5059 aa12.21□□□□□ -0.45
NECAB3-220ENST00000606699 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
NECAB3-220ENST00000606699 TRAV26-2A0A0B4J265 109 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 LINC00862A6NCI5 91 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 F8W036 122 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 H7C1H1 209 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 WFDC2Q14508 124 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
NECAB3-220ENST00000606699 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms