RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 ZFAND2AQ8N6M9 145 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 POM121L12Q8N7R1 296 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 CLEC2BQ92478 149 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 SPANXCQ9NY87 97 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 LINC00527Q9UJ94 153 aa4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 PRRC2CQ9Y520 2896 aaKnown RBP4.82□□□□□ -1.64
SRGAP2-211ENST00000604423 DCHS1Q96JQ0 3298 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A087WWL8 130 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 ODF3BA8MYP8 253 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 M0R1W7 72 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 NPFFO15130 113 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 GNRH2O43555 120 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 IGF1P05019 195 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 CDSNQ15517 529 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 DEFB121Q5J5C9 76 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 UBTD1Q9HAC8 227 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 SPENQ96T58 3664 aaKnown RBP4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 PKDREJQ9NTG1 2253 aa4.81□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A0G2JNJ9 132 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 TRBV27A0A0K0K1C4 114 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 OOSP1A8MZH6 123 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 ATP6V0E1O15342 81 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 NXPH4O95158 308 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 NPC2P61916 151 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 HERVK_113P63121 156 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 EBI3Q14213 229 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 MIAQ16674 131 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 VMO1Q7Z5L0 202 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 LINC00643Q86TS7 51 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 LRRC75A-AS1Q8N1F1 130 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 OR13C6PQ8NH95 151 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 ITLN2Q8WWU7 325 aaPredicted RBP4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 Q9UFV3 132 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 CDX4O14627 284 aaPredicted RBP4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 IGHV3-30-3P0DP02 117 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 CD28P10747 220 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 LY6G5BQ8NDX9 201 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 OPRPNQ99935 248 aaPredicted RBP4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A0J9YXV3 536 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 TRBV6-5A0A0K0K1A5 114 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 A0A1B0GX51 115 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 I3L3M4 83 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 ATP5J2P56134 94 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 MINOS1Q5TGZ0 78 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 Q8N6K4 173 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 Q8N9W7 124 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 LINC00526Q96FQ7 95 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 NDUFA12Q9UI09 145 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 MINOS1-NBL1R4GNA1 71 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 ROS1P08922 2347 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 TMEM61Q8N0U2 210 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 JPT2Q9H910 190 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 ZNF580Q9UK33 172 aa4.79□□□□□ -1.64
SRGAP2-211ENST00000604423 ZZEF1O43149 2961 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 IGHV1-58A0A0C4DH39 117 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 ATOX1O00244 68 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 COX7CP15954 63 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 CXCL5P42830 114 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 LINC00315P59091 139 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 CEMP1Q6PRD7 247 aaPredicted RBP4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 TMEM219Q86XT9 240 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 C20orf203Q8NBC4 194 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 EDA2RQ9HAV5 297 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 MUC4Q99102 2169 aa4.78□□□□□ -1.64
SRGAP2-211ENST00000604423 IGKV3-7A0A075B6H7 116 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 TRAV12-3A0A0B4J271 114 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 F6UB75 175 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 G3V318 75 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 FSHBP01225 129 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 DEFB1P60022 68 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 IGFL3Q6UXB1 125 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 APRG1Q8IVJ8 170 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 LITAFQ99732 161 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 SMG1Q96Q15 3661 aaKnown RBP4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 INAFM2P0DMQ5 153 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 PF4V1P10720 104 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 Q6ZSV7 163 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 FAM19A4Q96LR4 140 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 DUX5Q96PT3 197 aa4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
SRGAP2-211ENST00000604423 PRRC2AP48634 2157 aaKnown RBP4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 COX7A2LO14548 114 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 TRACP01848 142 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
SRGAP2-211ENST00000604423 PEMTQ9UBM1 199 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms