RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	CYSLTR1	Q9Y271	337 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232		J3KRW8	73 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	MGP	P08493	103 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	ID1	P41134	155 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	GAGE13	Q4V321	117 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	AMTN	Q6UX39	209 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	KLK15	Q9H2R5	256 aa		11.48	□□□□□ -0.57
CELF4-223	ENST00000603232	TMEM95	Q3KNT9	176 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	ETDB	Q3ZM63	59 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	TMEM141	Q96I45	108 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	FBN1	P35555	2871 aa	Known RBP	11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	TRBV6-5	A0A0K0K1A5	114 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	IGIP	A6NJ69	53 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232		J3QR89	54 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	CRYGD	P07320	174 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	PF4V1	P10720	104 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	TIMM17A	Q99595	171 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	PRADC1	Q9BSG0	188 aa		11.47	□□□□□ -0.57
CELF4-223	ENST00000603232	TMEM238L	A0A1B0GVL6	79 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232		A6NJY4	79 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232		F6UB75	175 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232	IGHV3-11	P01762	117 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232	RPL11	P62913	178 aa	Known RBP	11.46	□□□□□ -0.58
CELF4-223	ENST00000603232	FAM159A	Q6UWV7	190 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232	DCANP1	Q8TF63	244 aa		11.46	□□□□□ -0.58
CELF4-223	ENST00000603232	VCY	O14598	125 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	DEFB1	P60022	68 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232		Q6ZSV7	163 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	ZNF702P	Q9H963	129 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	LGALS9	O00182	355 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	SMAGP	Q0VAQ4	97 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	ZFP2	Q6ZN57	461 aa		11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.45	□□□□□ -0.58
CELF4-223	ENST00000603232	IGLV4-69	A0A075B6H9	119 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	TRBV27	A0A0K0K1C4	114 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	TSHB	P01222	138 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	SMCP	P49901	116 aa	Predicted RBP	11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	INSL3	P51460	131 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	UBE2D1	P51668	147 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	PMVK	Q15126	192 aa		11.44	□□□□□ -0.58
CELF4-223	ENST00000603232	TMEM89	A2RUT3	159 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	SPRY2	O43597	315 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	DUSP14	O95147	198 aa	Known RBP	11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	HERVK_113	P61574	105 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	LCNL1	Q6ZST4	164 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	C9orf85	Q96MD7	179 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	KIR2DL4	Q99706	377 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	TENM1	Q9UKZ4	2725 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	ZNF815P	A8K554	130 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	KRTAP24-1	Q3LI83	254 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	SUMO4	Q6EEV6	95 aa		11.43	□□□□□ -0.58
CELF4-223	ENST00000603232	CFAP126	Q5VTH2	177 aa		11.42	□□□□□ -0.58
CELF4-223	ENST00000603232	RNF152	Q8N8N0	203 aa		11.42	□□□□□ -0.58
CELF4-223	ENST00000603232	ATP6V0E2	Q8NHE4	81 aa		11.42	□□□□□ -0.58
CELF4-223	ENST00000603232	PLEKHB2	Q96CS7	222 aa		11.42	□□□□□ -0.58
CELF4-223	ENST00000603232	TP53TG1	Q9Y2A0	90 aa		11.42	□□□□□ -0.58
CELF4-223	ENST00000603232	C11orf86	A6NJI1	115 aa		11.41	□□□□□ -0.58
CELF4-223	ENST00000603232	CD7	P09564	240 aa		11.41	□□□□□ -0.58
CELF4-223	ENST00000603232	PSMB8	P28062	276 aa		11.41	□□□□□ -0.58
CELF4-223	ENST00000603232	MTURN	Q8N3F0	131 aa		11.41	□□□□□ -0.58
CELF4-223	ENST00000603232	UBE2D3	P61077	147 aa		11.4	□□□□□ -0.58
CELF4-223	ENST00000603232	UBE2D2	P62837	147 aa		11.4	□□□□□ -0.58
CELF4-223	ENST00000603232	ZNF876P	Q49A33	203 aa		11.4	□□□□□ -0.58
CELF4-223	ENST00000603232	HIST2H2BD	Q6DRA6	164 aa		11.4	□□□□□ -0.58
CELF4-223	ENST00000603232	PGPEP1	Q9NXJ5	209 aa		11.4	□□□□□ -0.58
CELF4-223	ENST00000603232	IGHV3-16	A0A0C4DH30	117 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	SDHAF1	A6NFY7	115 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	FOXI1	Q12951	378 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	RHOH	Q15669	191 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	NSUN5P1	Q3KNT7	163 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	C10orf99	Q6UWK7	81 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	SCGB1D4	Q6XE38	83 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232		A0A0J9YY99	117 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232		Q8N2B8	174 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	SYT8	Q8NBV8	401 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	LINC01006	Q8NI28	216 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	C1QTNF4	Q9BXJ3	329 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	CDIP1	Q9H305	208 aa		11.39	□□□□□ -0.59
CELF4-223	ENST00000603232	COL6A5	A8TX70	2615 aa		11.38	□□□□□ -0.59
CELF4-223	ENST00000603232	IGKV3-7	A0A075B6H7	116 aa		11.38	□□□□□ -0.59
CELF4-223	ENST00000603232		A0A0J9YX75	114 aa		11.38	□□□□□ -0.59
CELF4-223	ENST00000603232	TSPAN13	O95857	204 aa		11.38	□□□□□ -0.59
CELF4-223	ENST00000603232	NFE4	Q86UQ8	179 aa		11.38	□□□□□ -0.59
CELF4-223	ENST00000603232	DLX4	Q92988	240 aa	Predicted RBP	11.38	□□□□□ -0.59
CELF4-223	ENST00000603232	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	TCTEX1D4	Q5JR98	221 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	JPT2	Q9H910	190 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	TRAV12-3	A0A0B4J271	114 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232		K7EQG2	157 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232		M0QY20	66 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	NDUFA7	O95182	113 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	LYRM7	Q5U5X0	104 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	SBSPON	Q8IVN8	264 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	SLC25A29	Q8N8R3	303 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	EDA2R	Q9HAV5	297 aa		11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.37	□□□□□ -0.59
CELF4-223	ENST00000603232	APOM	O95445	188 aa		11.36	□□□□□ -0.59
CELF4-223	ENST00000603232	SNRPD3	P62318	126 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-223	ENST00000603232	C16orf95	Q9H693	158 aa		11.36	□□□□□ -0.59
CELF4-223	ENST00000603232	MRPL16	Q9NX20	251 aa	Known RBP	11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms