RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
PPFIA3-210ENST00000602800 M0R381 172 aa13□□□□□ -0.33
PPFIA3-210ENST00000602800 SRIP30626 198 aa13□□□□□ -0.33
PPFIA3-210ENST00000602800 CTRLP40313 264 aa13□□□□□ -0.33
PPFIA3-210ENST00000602800 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
PPFIA3-210ENST00000602800 FHL2Q14192 279 aa13□□□□□ -0.33
PPFIA3-210ENST00000602800 GTSF1Q8WW33 167 aa13□□□□□ -0.33
PPFIA3-210ENST00000602800 TRGV4A0A0C4DH28 118 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 C7orf77A4D0Y5 90 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 PGLYRP4Q96LB8 373 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 RPS10P5Q9NQ39 176 aa12.99□□□□□ -0.33
PPFIA3-210ENST00000602800 A0A087WWC5 75 aa12.98□□□□□ -0.33
PPFIA3-210ENST00000602800 A8MWV9 139 aa12.98□□□□□ -0.33
PPFIA3-210ENST00000602800 DMRTA1Q5VZB9 504 aa12.98□□□□□ -0.33
PPFIA3-210ENST00000602800 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
PPFIA3-210ENST00000602800 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 K7EQD1 137 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 Q6ZSN1 163 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 OR4C5Q8NGB2 326 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 TMEM242Q9NWH2 141 aa12.97□□□□□ -0.33
PPFIA3-210ENST00000602800 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 CIDEAO60543 219 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 SSTP61278 116 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 C10orf126Q8N4M7 172 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 NUP35Q8NFH5 326 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 IMMP2LQ96T52 175 aa12.96□□□□□ -0.33
PPFIA3-210ENST00000602800 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 RS1O15537 224 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 CRYGDP07320 174 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 TRGC1P0CF51 173 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 RIGQ13278 110 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 TWIST1Q15672 202 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 SMIM15Q7Z3B0 74 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
PPFIA3-210ENST00000602800 J3QL48 77 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 PSCAO43653 123 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 GYPEP15421 78 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 NTF3P20783 257 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 S100PP25815 95 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 HAMPP81172 84 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 AP1S3Q96PC3 154 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 TMEM70Q9BUB7 260 aa12.94□□□□□ -0.34
PPFIA3-210ENST00000602800 SMIM17P0DL12 118 aa12.93□□□□□ -0.34
PPFIA3-210ENST00000602800 CFAP126Q5VTH2 177 aa12.93□□□□□ -0.34
PPFIA3-210ENST00000602800 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
PPFIA3-210ENST00000602800 RHODO00212 210 aa12.92□□□□□ -0.34
PPFIA3-210ENST00000602800 NTN5Q8WTR8 489 aaPredicted RBP12.92□□□□□ -0.34
PPFIA3-210ENST00000602800 A0A1B0GW15 77 aa12.91□□□□□ -0.34
PPFIA3-210ENST00000602800 S100A8P05109 93 aa12.91□□□□□ -0.34
PPFIA3-210ENST00000602800 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
PPFIA3-210ENST00000602800 JPT2Q9H910 190 aa12.91□□□□□ -0.34
PPFIA3-210ENST00000602800 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
PPFIA3-210ENST00000602800 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
PPFIA3-210ENST00000602800 BTF3L4Q96K17 158 aa12.9□□□□□ -0.34
PPFIA3-210ENST00000602800 A0A087WWL8 130 aa12.89□□□□□ -0.35
PPFIA3-210ENST00000602800 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
PPFIA3-210ENST00000602800 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
PPFIA3-210ENST00000602800 ATP5L2Q7Z4Y8 100 aa12.89□□□□□ -0.35
PPFIA3-210ENST00000602800 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
PPFIA3-210ENST00000602800 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
PPFIA3-210ENST00000602800 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
PPFIA3-210ENST00000602800 IGHV3-38A0A0C4DH36 116 aa12.87□□□□□ -0.35
PPFIA3-210ENST00000602800 LRCOL1A6NCL2 159 aa12.87□□□□□ -0.35
PPFIA3-210ENST00000602800 ATRAIDQ6UW56 229 aa12.87□□□□□ -0.35
PPFIA3-210ENST00000602800 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
PPFIA3-210ENST00000602800 CAMPP49913 170 aa12.86□□□□□ -0.35
PPFIA3-210ENST00000602800 HBBP68871 147 aa12.86□□□□□ -0.35
PPFIA3-210ENST00000602800 URGCP-MRPS24S4R325 110 aa12.86□□□□□ -0.35
PPFIA3-210ENST00000602800 F5H697 171 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 MGPP08493 103 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 TIRAPP58753 221 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 RAB4BP61018 213 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 ZNF56Q15929 161 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 Q8N814 137 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 TMEM191AQ9H0A3 160 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 SMCO4Q9NRQ5 59 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 KIF25-AS1Q9Y6Z4 181 aa12.85□□□□□ -0.35
PPFIA3-210ENST00000602800 TRBV6-4A0A1B0GX49 114 aa12.84□□□□□ -0.35
PPFIA3-210ENST00000602800 A0A1B0GXF2 115 aa12.84□□□□□ -0.35
PPFIA3-210ENST00000602800 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
PPFIA3-210ENST00000602800 RASL11AQ6T310 242 aa12.84□□□□□ -0.35
PPFIA3-210ENST00000602800 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 IBA57-AS1B1ANH7 110 aa12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 PLA2G1BP04054 148 aaKnown RBP12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 PRADC1Q9BSG0 188 aa12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 Q9HAA7 133 aa12.83□□□□□ -0.36
PPFIA3-210ENST00000602800 RHOHQ15669 191 aa12.82□□□□□ -0.36
PPFIA3-210ENST00000602800 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
PPFIA3-210ENST00000602800 H7C1H1 209 aa12.81□□□□□ -0.36
PPFIA3-210ENST00000602800 COX19Q49B96 90 aa12.81□□□□□ -0.36
PPFIA3-210ENST00000602800 OR10J3Q5JRS4 329 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms