RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 RHOHQ15669 191 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 ZNF48Q96MX3 618 aaPredicted RBP8.38□□□□□ -1.07
ZNF558-207ENST00000601372 NOTCH2Q04721 2471 aa8.38□□□□□ -1.07
ZNF558-207ENST00000601372 TRBV6-1A0A0K0K1D8 114 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 LEPROTO15243 131 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 IGKV2D-24A0A075B6R9 120 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
ZNF558-207ENST00000601372 IGLV2-11P01706 119 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 GYPEP15421 78 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 C6orf226Q5I0X4 101 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 C11orf45Q8TAV5 145 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 Q8N1Y9 231 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 ODF1Q14990 250 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
ZNF558-207ENST00000601372 TAL2Q16559 108 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 PRO1854Q9UHT4 67 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 CACNA1AO00555 2505 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 PFN2P35080 140 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 DEFB114Q30KQ6 69 aa8.35□□□□□ -1.07
ZNF558-207ENST00000601372 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
ZNF558-207ENST00000601372 PSMB8P28062 276 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 EBI3Q14213 229 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 SPATA25Q9BR10 227 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 SPTBN4Q9H254 2564 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 H3BMM0 161 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 LGALS9O00182 355 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 NDUFA7O95182 113 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 S100A7L2Q5SY68 101 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
ZNF558-207ENST00000601372 LINC00310P59036 64 aa8.33□□□□□ -1.08
ZNF558-207ENST00000601372 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
ZNF558-207ENST00000601372 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
ZNF558-207ENST00000601372 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
ZNF558-207ENST00000601372 LENEPQ9Y5L5 61 aa8.33□□□□□ -1.08
ZNF558-207ENST00000601372 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
ZNF558-207ENST00000601372 SLC25A20O43772 301 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 DAND5Q8N907 189 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 WFDC2Q14508 124 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 K7EQD1 137 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 P0DMU3 169 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 FAM231AP0DMU4 169 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 FAM231CP0DMU5 169 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 TRBV20-1A0A075B6N2 111 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 GAS8-AS1O95177 125 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 RNF185Q96GF1 192 aa8.31□□□□□ -1.08
ZNF558-207ENST00000601372 HIVEP3Q5T1R4 2406 aa8.3□□□□□ -1.08
ZNF558-207ENST00000601372 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
ZNF558-207ENST00000601372 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
ZNF558-207ENST00000601372 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
ZNF558-207ENST00000601372 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 NXPH4O95158 308 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 CARD19Q96LW7 228 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 Q8N6K4 173 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 A0A0J9YX75 114 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 RNF183Q96D59 192 aa8.29□□□□□ -1.08
ZNF558-207ENST00000601372 Q9H8V8 135 aa8.28□□□□□ -1.08
ZNF558-207ENST00000601372 Q8N976 141 aa8.28□□□□□ -1.08
ZNF558-207ENST00000601372 TMEM263Q8WUH6 116 aaKnown RBP8.28□□□□□ -1.08
ZNF558-207ENST00000601372 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
ZNF558-207ENST00000601372 CFC1P0CG37 223 aa8.28□□□□□ -1.08
ZNF558-207ENST00000601372 C1orf43Q9BWL3 253 aa8.28□□□□□ -1.08
ZNF558-207ENST00000601372 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.08
ZNF558-207ENST00000601372 XCL1P47992 114 aa8.27□□□□□ -1.08
ZNF558-207ENST00000601372 U3KQK5 164 aa8.27□□□□□ -1.08
ZNF558-207ENST00000601372 A4D1N5 150 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
ZNF558-207ENST00000601372 NOTCH3Q9UM47 2321 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 CHD7Q9P2D1 2997 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 HERVK_113P63121 156 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 WNK1Q9H4A3 2382 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
ZNF558-207ENST00000601372 ANKRD11Q6UB99 2663 aaPredicted RBP8.27□□□□□ -1.09
ZNF558-207ENST00000601372 HIGD1BQ9P298 99 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms