RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	GFRA4	Q9GZZ7	299 aa		13.7	□□□□□ -0.22
GTPBP3-223	ENST00000600995	TNFRSF18	Q9Y5U5	241 aa		13.7	□□□□□ -0.22
GTPBP3-223	ENST00000600995		C9JQL5	133 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995		M0QY20	66 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	MGP	P08493	103 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	LAGE3	Q14657	143 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	TMEM97	Q5BJF2	176 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	DAZ4	Q86SG3	579 aa	Known RBP	13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	C15orf54	Q8N8G6	183 aa		13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	DAZ3	Q9NR90	486 aa	Known RBP	13.69	□□□□□ -0.22
GTPBP3-223	ENST00000600995	IGHV3-30	P01768	117 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	IGHV3-33	P01772	117 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	IGHV3-30-3	P0DP02	117 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	IGHV3-30-5	P0DP03	117 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	RAB14	P61106	215 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	SRSF3	P84103	164 aa	Known RBP	13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	TSKU	Q8WUA8	353 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	NAT8	Q9UHE5	227 aa		13.68	□□□□□ -0.22
GTPBP3-223	ENST00000600995	SUMO4	Q6EEV6	95 aa		13.67	□□□□□ -0.22
GTPBP3-223	ENST00000600995	SMIM15	Q7Z3B0	74 aa		13.67	□□□□□ -0.22
GTPBP3-223	ENST00000600995	ISOC2	Q96AB3	205 aa		13.67	□□□□□ -0.22
GTPBP3-223	ENST00000600995	CHCHD7	Q9BUK0	85 aa		13.67	□□□□□ -0.22
GTPBP3-223	ENST00000600995	TRBV6-8	A0A0A6YYG3	113 aa		13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	RPL23	P62829	140 aa	Known RBP	13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	RASL11A	Q6T310	242 aa		13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	NIT1	Q86X76	327 aa		13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	BORCS7	Q96B45	105 aa		13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	URGCP-MRPS24	S4R325	110 aa		13.66	□□□□□ -0.22
GTPBP3-223	ENST00000600995	EREG	O14944	169 aa		13.65	□□□□□ -0.22
GTPBP3-223	ENST00000600995	FRZB	Q92765	325 aa		13.65	□□□□□ -0.22
GTPBP3-223	ENST00000600995	PGLYRP4	Q96LB8	373 aa		13.65	□□□□□ -0.22
GTPBP3-223	ENST00000600995	KCNIP4	Q6PIL6	250 aa		13.64	□□□□□ -0.23
GTPBP3-223	ENST00000600995	NIT2	Q9NQR4	276 aa		13.64	□□□□□ -0.23
GTPBP3-223	ENST00000600995		V9GYV3	84 aa		13.64	□□□□□ -0.23
GTPBP3-223	ENST00000600995	TRAV8-3	A0A0A6YYJ7	113 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995	HIGD1C	A8MV81	97 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995	PKIA	P61925	76 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995	ELOB	Q15370	118 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995	ADIRF	Q15847	76 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995	PKHD1	P08F94	4074 aa		13.63	□□□□□ -0.23
GTPBP3-223	ENST00000600995		A0A087WX48	190 aa		13.62	□□□□□ -0.23
GTPBP3-223	ENST00000600995		A0A1B0GUT8	65 aa		13.62	□□□□□ -0.23
GTPBP3-223	ENST00000600995	SPATA12	Q7Z6I5	190 aa		13.61	□□□□□ -0.23
GTPBP3-223	ENST00000600995		Q8N3U1	123 aa		13.61	□□□□□ -0.23
GTPBP3-223	ENST00000600995	TM2D2	Q9BX73	214 aa		13.61	□□□□□ -0.23
GTPBP3-223	ENST00000600995	PSCA	O43653	123 aa		13.6	□□□□□ -0.23
GTPBP3-223	ENST00000600995	TRBV25-1	A0A075B6N4	114 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995		A0A087WTM6	91 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	C16orf90	A8MZG2	172 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	TMEM262	E9PQX1	116 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	CLLU1	Q5K131	121 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	NTM-AS1	Q6ZSK4	140 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	GATD1	Q8NB37	220 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995		Q9HAA7	133 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	PGPEP1	Q9NXJ5	209 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	NAT8B	Q9UHF3	227 aa		13.59	□□□□□ -0.23
GTPBP3-223	ENST00000600995	IQCJ	Q1A5X6	159 aa		13.58	□□□□□ -0.24
GTPBP3-223	ENST00000600995	CHCHD5	Q9BSY4	110 aa		13.58	□□□□□ -0.24
GTPBP3-223	ENST00000600995	TMEM191A	Q9H0A3	160 aa		13.58	□□□□□ -0.24
GTPBP3-223	ENST00000600995	COX11	Q9Y6N1	276 aa		13.58	□□□□□ -0.24
GTPBP3-223	ENST00000600995	DNAH11	Q96DT5	4516 aa		13.58	□□□□□ -0.24
GTPBP3-223	ENST00000600995	IGHV1-24	A0A0C4DH33	117 aa		13.57	□□□□□ -0.24
GTPBP3-223	ENST00000600995	RIG	Q13278	110 aa		13.57	□□□□□ -0.24
GTPBP3-223	ENST00000600995	NUP35	Q8NFH5	326 aa		13.57	□□□□□ -0.24
GTPBP3-223	ENST00000600995	SMIM27	A0A1W2PRY6	76 aa		13.56	□□□□□ -0.24
GTPBP3-223	ENST00000600995	KRTAP10-2	P60368	255 aa		13.56	□□□□□ -0.24
GTPBP3-223	ENST00000600995	CDPF1	Q6NVV7	123 aa		13.56	□□□□□ -0.24
GTPBP3-223	ENST00000600995	RMI2	Q96E14	147 aa		13.56	□□□□□ -0.24
GTPBP3-223	ENST00000600995	KLK12	Q9UKR0	248 aa		13.56	□□□□□ -0.24
GTPBP3-223	ENST00000600995		Q0VG73	95 aa		13.55	□□□□□ -0.24
GTPBP3-223	ENST00000600995	DYNC1H1	Q14204	4646 aa	Known RBP	13.54	□□□□□ -0.24
GTPBP3-223	ENST00000600995	TRAV26-2	A0A0B4J265	109 aa		13.54	□□□□□ -0.24
GTPBP3-223	ENST00000600995	LRCOL1	A6NCL2	159 aa		13.54	□□□□□ -0.24
GTPBP3-223	ENST00000600995	IFITM2	Q01629	132 aa		13.53	□□□□□ -0.24
GTPBP3-223	ENST00000600995	PNRC1	Q12796	327 aa	Predicted RBP	13.53	□□□□□ -0.24
GTPBP3-223	ENST00000600995	MPV17L2	Q567V2	206 aa		13.53	□□□□□ -0.24
GTPBP3-223	ENST00000600995	ATRAID	Q6UW56	229 aa		13.53	□□□□□ -0.24
GTPBP3-223	ENST00000600995		A0A1B0GW15	77 aa		13.52	□□□□□ -0.25
GTPBP3-223	ENST00000600995	COTL1	Q14019	142 aa		13.52	□□□□□ -0.25
GTPBP3-223	ENST00000600995	UBE2W	Q96B02	151 aa		13.52	□□□□□ -0.25
GTPBP3-223	ENST00000600995	TRBV6-5	A0A0K0K1A5	114 aa		13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	PPP1R2P9	O14990	202 aa		13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	RAB4A	P20338	218 aa		13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	RPL39L	Q96EH5	51 aa	Known RBP	13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	MRAP2	Q96G30	205 aa		13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	TMEM243	Q9BU79	118 aa		13.51	□□□□□ -0.25
GTPBP3-223	ENST00000600995	NCR2	O95944	276 aa		13.5	□□□□□ -0.25
GTPBP3-223	ENST00000600995	ANG	P03950	147 aa	Known RBP	13.5	□□□□□ -0.25
GTPBP3-223	ENST00000600995	GAGE6	Q13070	117 aa		13.5	□□□□□ -0.25
GTPBP3-223	ENST00000600995	RNF185	Q96GF1	192 aa		13.5	□□□□□ -0.25
GTPBP3-223	ENST00000600995		A0A1B0GUV1	79 aa		13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	SDHAF1	A6NFY7	115 aa		13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	CRP	P02741	224 aa		13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	RBX1	P62877	108 aa		13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	UQCC3	Q6UW78	93 aa		13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	NTN5	Q8WTR8	489 aa	Predicted RBP	13.49	□□□□□ -0.25
GTPBP3-223	ENST00000600995	IGKV2D-24	A0A075B6R9	120 aa		13.48	□□□□□ -0.25
GTPBP3-223	ENST00000600995	CDK2AP2	O75956	126 aa		13.48	□□□□□ -0.25
GTPBP3-223	ENST00000600995	PPP1R17	O96001	155 aa		13.48	□□□□□ -0.25
GTPBP3-223	ENST00000600995	AMT	P48728	403 aa		13.48	□□□□□ -0.25

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