RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RPP21	Q9H633	154 aa	Known RBP	10.32	□□□□□ -0.76
PLD3-223	ENST00000600948	HSPG2	P98160	4391 aa		10.32	□□□□□ -0.76
PLD3-223	ENST00000600948	PCLO	Q9Y6V0	5065 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	TRBV6-8	A0A0A6YYG3	113 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	TRAV8-3	A0A0A6YYJ7	113 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	MGP	P08493	103 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	CHCHD7	Q9BUK0	85 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	TM2D2	Q9BX73	214 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948	URGCP-MRPS24	S4R325	110 aa		10.31	□□□□□ -0.76
PLD3-223	ENST00000600948		M0QY20	66 aa		10.3	□□□□□ -0.76
PLD3-223	ENST00000600948	NDUFS6	O75380	124 aa	Known RBP	10.3	□□□□□ -0.76
PLD3-223	ENST00000600948	TRGC1	P0CF51	173 aa		10.3	□□□□□ -0.76
PLD3-223	ENST00000600948	WDR73	Q6P4I2	378 aa		10.3	□□□□□ -0.76
PLD3-223	ENST00000600948	FAM210A	Q96ND0	272 aa		10.3	□□□□□ -0.76
PLD3-223	ENST00000600948	CNFN	Q9BYD5	112 aa		10.3	□□□□□ -0.76
PLD3-223	ENST00000600948		A0A087WX48	190 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	NTF3	P20783	257 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	CEBPG	P53567	150 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	SUMO4	Q6EEV6	95 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	KRTAP4-5	Q9BYR2	181 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	KLK12	Q9UKR0	248 aa		10.29	□□□□□ -0.76
PLD3-223	ENST00000600948	APOB	P04114	4563 aa	Known RBP	10.29	□□□□□ -0.76
PLD3-223	ENST00000600948		H7C1H1	209 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	KRTAP10-1	P60331	282 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	WFDC2	Q14508	124 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	NTM-AS1	Q6ZSK4	140 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	FAM231D	Q6ZW35	169 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948		Q8N814	137 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	MAPKAPK5-AS1	Q8N8E1	139 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	DNAJC30	Q96LL9	226 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	EIF5A2	Q9GZV4	153 aa	Known RBP	10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	DPH3P1	Q9H4G8	78 aa		10.28	□□□□□ -0.76
PLD3-223	ENST00000600948	GATC	O43716	136 aa	Known RBP	10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	SRP19	P09132	144 aa	Known RBP	10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	ELOB	Q15370	118 aa		10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	TMEM97	Q5BJF2	176 aa		10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	NTN5	Q8WTR8	489 aa	Predicted RBP	10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	GTSF1	Q8WW33	167 aa		10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	SMIM7	Q9BQ49	75 aa		10.27	□□□□□ -0.77
PLD3-223	ENST00000600948	MPV17L2	Q567V2	206 aa		10.26	□□□□□ -0.77
PLD3-223	ENST00000600948	KCNIP4	Q6PIL6	250 aa		10.26	□□□□□ -0.77
PLD3-223	ENST00000600948	RASL11A	Q6T310	242 aa		10.26	□□□□□ -0.77
PLD3-223	ENST00000600948	UBE2W	Q96B02	151 aa		10.26	□□□□□ -0.77
PLD3-223	ENST00000600948	TMEM262	E9PQX1	116 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	GCSH	P23434	173 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	TWIST1	Q15672	202 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	ATRAID	Q6UW56	229 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	LINC01551	Q86U37	167 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	RMI2	Q96E14	147 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	CHCHD5	Q9BSY4	110 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	COX11	Q9Y6N1	276 aa		10.25	□□□□□ -0.77
PLD3-223	ENST00000600948	IGLV5-52	A0A0A0MRZ9	124 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948	ZNF727	A8MUV8	499 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948		A8MWL6	223 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948	PKIA	P61925	76 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948	IQCJ	Q1A5X6	159 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948	CT83	Q5H943	113 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948		Q8N1X5	172 aa		10.24	□□□□□ -0.77
PLD3-223	ENST00000600948	TRBV25-1	A0A075B6N4	114 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	IGKV2D-24	A0A075B6R9	120 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	LECT2	O14960	151 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	XG	P55808	180 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	ENHO	Q6UWT2	76 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	NIT2	Q9NQR4	276 aa		10.23	□□□□□ -0.77
PLD3-223	ENST00000600948	ABCA13	Q86UQ4	5058 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	IGHV1-24	A0A0C4DH33	117 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	FOXA3	P55318	350 aa	Predicted RBP	10.22	□□□□□ -0.77
PLD3-223	ENST00000600948		Q0VG73	95 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	TEX261	Q6UWH6	196 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	C15orf54	Q8N8G6	183 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948		Q8N976	141 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	GATD1	Q8NB37	220 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	BAALC	Q8WXS3	180 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	PGLYRP4	Q96LB8	373 aa		10.22	□□□□□ -0.77
PLD3-223	ENST00000600948	ANG	P03950	147 aa	Known RBP	10.21	□□□□□ -0.77
PLD3-223	ENST00000600948	RBX1	P62877	108 aa		10.21	□□□□□ -0.77
PLD3-223	ENST00000600948	GAGE6	Q13070	117 aa		10.21	□□□□□ -0.77
PLD3-223	ENST00000600948	OSTC	Q9NRP0	149 aa		10.21	□□□□□ -0.77
PLD3-223	ENST00000600948	TRAV26-2	A0A0B4J265	109 aa		10.2	□□□□□ -0.78
PLD3-223	ENST00000600948		C9JQL5	133 aa		10.2	□□□□□ -0.78
PLD3-223	ENST00000600948	FRZB	Q92765	325 aa		10.2	□□□□□ -0.78
PLD3-223	ENST00000600948	CRP	P02741	224 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	SMIM15	Q7Z3B0	74 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	TSKU	Q8WUA8	353 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	C1orf43	Q9BWL3	253 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	GFRA4	Q9GZZ7	299 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	PRR34	Q9NV39	138 aa		10.19	□□□□□ -0.78
PLD3-223	ENST00000600948	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.18	□□□□□ -0.78
PLD3-223	ENST00000600948	SRSF3	P84103	164 aa	Known RBP	10.18	□□□□□ -0.78
PLD3-223	ENST00000600948	FAM74A3	Q4VXF1	159 aa		10.18	□□□□□ -0.78
PLD3-223	ENST00000600948	TMEM243	Q9BU79	118 aa		10.18	□□□□□ -0.78
PLD3-223	ENST00000600948		V9GYV3	84 aa		10.18	□□□□□ -0.78
PLD3-223	ENST00000600948	FAM231B	A6NCW3	169 aa		10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	HIGD1C	A8MV81	97 aa		10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	RPL23	P62829	140 aa	Known RBP	10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	MIA	Q16674	131 aa		10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	TMEM241	Q24JQ0	296 aa		10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	DEFB104A	Q8WTQ1	72 aa		10.17	□□□□□ -0.78
PLD3-223	ENST00000600948	ISOC2	Q96AB3	205 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms