RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 C10orf126Q8N4M7 172 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 FER1L6-AS1Q8NA97 138 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 TPPP3Q9BW30 176 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 IL36BQ9NZH7 164 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
HIF3A-219ENST00000600879 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
HIF3A-219ENST00000600879 LOC100131303A0A0U1RQF7 123 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 K7EP13 123 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 M0R2P5 195 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 LECT2O14960 151 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 SNAI2O43623 268 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 OXTP01178 125 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 IGLC6P0CF74 106 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 SLAQ13239 276 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 LYZL1Q6UWQ5 148 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 Q6ZSA8 131 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 SCXQ7RTU7 201 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 TSKUQ8WUA8 353 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 ZNF479Q96JC4 524 aa6.61□□□□□ -1.35
HIF3A-219ENST00000600879 MUC21A0A0G2JKD1 596 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 MUC21A0A140T8X8 626 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 M0R381 172 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 SNAPINO95295 136 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 IGHV3-30P01768 117 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 IGHV3-33P01772 117 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 OR5AL1P0C617 328 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 IGHV3-30-5P0DP03 117 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 SSTP61278 116 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 SPANXN1Q5VSR9 72 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 SVBPQ8N300 66 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 OR10AG1Q8NH19 301 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 PGLYRP4Q96LB8 373 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
HIF3A-219ENST00000600879 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
HIF3A-219ENST00000600879 IGHV3-38A0A0C4DH36 116 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 C7orf77A4D0Y5 90 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 FAM231BA6NCW3 169 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 HIGD1CA8MV81 97 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 F2Z2F3 143 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 CACNG7P62955 275 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 RHEBQ15382 184 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 ZFP82Q8N141 532 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 PTH2Q96A98 100 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 BORCS7Q96B45 105 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 CTDSP1Q9GZU7 261 aa6.59□□□□□ -1.35
HIF3A-219ENST00000600879 SMIM27A0A1W2PRY6 76 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 IBA57-AS1B1ANH7 110 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 CTRLP40313 264 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 HNRNPA3P51991 378 aaKnown RBP6.58□□□□□ -1.36
HIF3A-219ENST00000600879 DMRTA1Q5VZB9 504 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 RASL10AQ92737 203 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 NAT8BQ9UHF3 227 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
HIF3A-219ENST00000600879 A0A087WWC5 75 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 RS1O15537 224 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 NTF3P20783 257 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 FOXA3P55318 350 aaPredicted RBP6.57□□□□□ -1.36
HIF3A-219ENST00000600879 TWIST1Q15672 202 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 OR10J3Q5JRS4 329 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 PIK3CD-AS1Q5SR53 167 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 WDR73Q6P4I2 378 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 OR4C5Q8NGB2 326 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 JPT2Q9H910 190 aa6.57□□□□□ -1.36
HIF3A-219ENST00000600879 A0A1B0GUT8 65 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 A8MWV9 139 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 TRGC1P0CF51 173 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 S100PP25815 95 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 RIGQ13278 110 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 KCNIP4Q6PIL6 250 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 Q8N3U1 123 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 CNFNQ9BYD5 112 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 LRP2P98164 4655 aa6.56□□□□□ -1.36
HIF3A-219ENST00000600879 A0A087WWL8 130 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 IGHV3-73A0A0B4J1V6 119 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 FAM74A4Q5TZK3 123 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 CFAP126Q5VTH2 177 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
HIF3A-219ENST00000600879 ATRAIDQ6UW56 229 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 SMIM15Q7Z3B0 74 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 CIRBP-AS1Q8TBR5 109 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 IMMP2LQ96T52 175 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 TMEM242Q9NWH2 141 aa6.55□□□□□ -1.36
HIF3A-219ENST00000600879 TRAV8-6A0A0B4J262 113 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 RHODO00212 210 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 CIDEAO60543 219 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 SMIM17P0DL12 118 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 ODF1Q14990 250 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 C14orf178Q8N769 122 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms