RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 LY6G6CO95867 125 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 LINC00315P59091 139 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 ATP6V0E2Q8NHE4 81 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 BIRC6Q9NR09 4857 aa11.61□□□□□ -0.55
USHBP1-210ENST00000600286 TRBV7-3A0A075B6L6 115 aa11.6□□□□□ -0.55
USHBP1-210ENST00000600286 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
USHBP1-210ENST00000600286 PPP1R17O96001 155 aa11.59□□□□□ -0.55
USHBP1-210ENST00000600286 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
USHBP1-210ENST00000600286 M0QY20 66 aa11.58□□□□□ -0.56
USHBP1-210ENST00000600286 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
USHBP1-210ENST00000600286 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
USHBP1-210ENST00000600286 URGCP-MRPS24S4R325 110 aa11.58□□□□□ -0.56
USHBP1-210ENST00000600286 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
USHBP1-210ENST00000600286 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 RAB4AP20338 218 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 ESRGQ1W209 222 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 COX19Q49B96 90 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 FAM104BQ5XKR9 115 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 GTSF1LQ9H1H1 148 aa11.57□□□□□ -0.56
USHBP1-210ENST00000600286 TIRAPP58753 221 aa11.56□□□□□ -0.56
USHBP1-210ENST00000600286 KMT2AQ03164 3969 aa11.56□□□□□ -0.56
USHBP1-210ENST00000600286 TMEM97Q5BJF2 176 aa11.56□□□□□ -0.56
USHBP1-210ENST00000600286 DAZ4Q86SG3 579 aaKnown RBP11.56□□□□□ -0.56
USHBP1-210ENST00000600286 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
USHBP1-210ENST00000600286 DAZ3Q9NR90 486 aaKnown RBP11.56□□□□□ -0.56
USHBP1-210ENST00000600286 TRAV8-6A0A0B4J262 113 aa11.55□□□□□ -0.56
USHBP1-210ENST00000600286 CKS2P33552 79 aa11.55□□□□□ -0.56
USHBP1-210ENST00000600286 UBE2D3P61077 147 aa11.55□□□□□ -0.56
USHBP1-210ENST00000600286 UBE2D2P62837 147 aa11.55□□□□□ -0.56
USHBP1-210ENST00000600286 OR10J3Q5JRS4 329 aa11.55□□□□□ -0.56
USHBP1-210ENST00000600286 FRAS1Q86XX4 4008 aa11.54□□□□□ -0.56
USHBP1-210ENST00000600286 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
USHBP1-210ENST00000600286 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
USHBP1-210ENST00000600286 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
USHBP1-210ENST00000600286 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
USHBP1-210ENST00000600286 PPBPP02775 128 aa11.53□□□□□ -0.56
USHBP1-210ENST00000600286 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
USHBP1-210ENST00000600286 SMCO4Q9NRQ5 59 aa11.53□□□□□ -0.56
USHBP1-210ENST00000600286 Q9UF83 564 aa11.53□□□□□ -0.56
USHBP1-210ENST00000600286 LINC00694P0DN24 101 aa11.52□□□□□ -0.57
USHBP1-210ENST00000600286 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
USHBP1-210ENST00000600286 LELP1Q5T871 98 aa11.52□□□□□ -0.57
USHBP1-210ENST00000600286 UPK3BQ9BT76 320 aa11.51□□□□□ -0.57
USHBP1-210ENST00000600286 HLA-DQA1P01909 254 aa11.5□□□□□ -0.57
USHBP1-210ENST00000600286 TMEM136Q6ZRR5 245 aa11.5□□□□□ -0.57
USHBP1-210ENST00000600286 ORMDL3Q8N138 153 aa11.5□□□□□ -0.57
USHBP1-210ENST00000600286 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
USHBP1-210ENST00000600286 GNB1LQ9BYB4 327 aa11.5□□□□□ -0.57
USHBP1-210ENST00000600286 Q9H8V8 135 aa11.5□□□□□ -0.57
USHBP1-210ENST00000600286 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 TRBV6-5A0A0K0K1A5 114 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 SIVA1O15304 175 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 MT-ND6P03923 174 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 PMCHP20382 165 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 COTL1Q14019 142 aa11.49□□□□□ -0.57
USHBP1-210ENST00000600286 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 D6R8Y8 96 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 NCR2O95944 276 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 APCSP02743 223 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 PKIAP61925 76 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 ELOBQ15370 118 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
USHBP1-210ENST00000600286 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 I3L3M4 83 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 VCYO14598 125 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 PHOX2AO14813 284 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
USHBP1-210ENST00000600286 DNAH6Q9C0G6 4158 aa11.46□□□□□ -0.57
USHBP1-210ENST00000600286 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
USHBP1-210ENST00000600286 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
USHBP1-210ENST00000600286 S100A1P23297 94 aa11.46□□□□□ -0.57
USHBP1-210ENST00000600286 SUMO2P61956 95 aaKnown RBP11.46□□□□□ -0.57
USHBP1-210ENST00000600286 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
USHBP1-210ENST00000600286 VPS13DQ5THJ4 4388 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 K7EP13 123 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 TCAPO15273 167 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 TNFRSF6BO95407 300 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 FABP9Q0Z7S8 132 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 KIR2DL4Q99706 377 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 CHCHD5Q9BSY4 110 aa11.45□□□□□ -0.58
USHBP1-210ENST00000600286 IGLV2-18A0A075B6J9 118 aa11.44□□□□□ -0.58
USHBP1-210ENST00000600286 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
USHBP1-210ENST00000600286 FCER1GP30273 86 aa11.44□□□□□ -0.58
USHBP1-210ENST00000600286 RPS10P46783 165 aaKnown RBP11.44□□□□□ -0.58
USHBP1-210ENST00000600286 AMTP48728 403 aa11.44□□□□□ -0.58
USHBP1-210ENST00000600286 NRACQ8N912 160 aa11.44□□□□□ -0.58
USHBP1-210ENST00000600286 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms