RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 BTF3P20290 206 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 EVI2AP22794 236 aa9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 ADIRFQ15847 76 aa9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
SOX2-OT-227ENST00000597651 HERC1Q15751 4861 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 F5H697 171 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 MGPP08493 103 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 LELP1Q5T871 98 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 V9GYV3 84 aa9.23□□□□□ -0.93
SOX2-OT-227ENST00000597651 TRBV7-3A0A075B6L6 115 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 UBE2D3P61077 147 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 UBE2D2P62837 147 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 TWIST1Q15672 202 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
SOX2-OT-227ENST00000597651 TRAV8-6A0A0B4J262 113 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 M0QY20 66 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 Q8N1X5 172 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 C15orf54Q8N8G6 183 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 DPH3P1Q9H4G8 78 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.94
SOX2-OT-227ENST00000597651 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
SOX2-OT-227ENST00000597651 A0A087WWC5 75 aa9.19□□□□□ -0.94
SOX2-OT-227ENST00000597651 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
SOX2-OT-227ENST00000597651 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SOX2-OT-227ENST00000597651 Q8N3U1 123 aa9.19□□□□□ -0.94
SOX2-OT-227ENST00000597651 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
SOX2-OT-227ENST00000597651 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
SOX2-OT-227ENST00000597651 TRAV26-2A0A0B4J265 109 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 H7C1H1 209 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 K7EP13 123 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 NUP35Q8NFH5 326 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 BORCS7Q96B45 105 aa9.17□□□□□ -0.94
SOX2-OT-227ENST00000597651 XGP55808 180 aa9.16□□□□□ -0.94
SOX2-OT-227ENST00000597651 SMIM15Q7Z3B0 74 aa9.16□□□□□ -0.94
SOX2-OT-227ENST00000597651 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
SOX2-OT-227ENST00000597651 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
SOX2-OT-227ENST00000597651 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
SOX2-OT-227ENST00000597651 TRBV6-8A0A0A6YYG3 113 aa9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 NIT1Q86X76 327 aa9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.94
SOX2-OT-227ENST00000597651 MYCBP2O75592 4640 aa9.15□□□□□ -0.95
SOX2-OT-227ENST00000597651 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
SOX2-OT-227ENST00000597651 NIT2Q9NQR4 276 aa9.14□□□□□ -0.95
SOX2-OT-227ENST00000597651 A0A087WTM6 91 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 TMEM191AQ9H0A3 160 aa9.13□□□□□ -0.95
SOX2-OT-227ENST00000597651 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
SOX2-OT-227ENST00000597651 PNRC1Q12796 327 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-227ENST00000597651 RIGQ13278 110 aa9.12□□□□□ -0.95
SOX2-OT-227ENST00000597651 FRZBQ92765 325 aa9.12□□□□□ -0.95
SOX2-OT-227ENST00000597651 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 LAGE3Q14657 143 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 COMMD7Q86VX2 200 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 AMN1Q8IY45 258 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 Q9HAA7 133 aa9.11□□□□□ -0.95
SOX2-OT-227ENST00000597651 PPP1R2P9O14990 202 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 RAB4AP20338 218 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 CHCHD7Q9BUK0 85 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
SOX2-OT-227ENST00000597651 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
SOX2-OT-227ENST00000597651 A0A087WX48 190 aa9.09□□□□□ -0.95
SOX2-OT-227ENST00000597651 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
SOX2-OT-227ENST00000597651 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
SOX2-OT-227ENST00000597651 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-227ENST00000597651 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms