RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 IMMP2LQ96T52 175 aa9.91□□□□□ -0.82
VRK3-213ENST00000597215 MRPS16Q9Y3D3 137 aaKnown RBP9.91□□□□□ -0.82
VRK3-213ENST00000597215 CAMPP49913 170 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 TIRAPP58753 221 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 HBBP68871 147 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 RASL11AQ6T310 242 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 SVBPQ8N300 66 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 UPK3BQ9BT76 320 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.82
VRK3-213ENST00000597215 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 SNAPINO95295 136 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 UBE2D3P61077 147 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 UBE2D2P62837 147 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 FRZBQ92765 325 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 BTF3L4Q96K17 158 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 DNAJC30Q96LL9 226 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 GTSF1LQ9H1H1 148 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
VRK3-213ENST00000597215 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
VRK3-213ENST00000597215 S100PP25815 95 aa9.88□□□□□ -0.83
VRK3-213ENST00000597215 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
VRK3-213ENST00000597215 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
VRK3-213ENST00000597215 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
VRK3-213ENST00000597215 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
VRK3-213ENST00000597215 TRAV9-1A0A075B6T8 112 aa9.87□□□□□ -0.83
VRK3-213ENST00000597215 RAB4AP20338 218 aa9.87□□□□□ -0.83
VRK3-213ENST00000597215 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
VRK3-213ENST00000597215 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
VRK3-213ENST00000597215 LELP1Q5T871 98 aa9.86□□□□□ -0.83
VRK3-213ENST00000597215 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
VRK3-213ENST00000597215 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
VRK3-213ENST00000597215 Q9H8V8 135 aa9.86□□□□□ -0.83
VRK3-213ENST00000597215 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
VRK3-213ENST00000597215 DNAH6Q9C0G6 4158 aa9.86□□□□□ -0.83
VRK3-213ENST00000597215 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 TRAV8-6A0A0B4J262 113 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 SIVA1O15304 175 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
VRK3-213ENST00000597215 URGCP-MRPS24S4R325 110 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
VRK3-213ENST00000597215 RYR2Q92736 4967 aa9.83□□□□□ -0.84
VRK3-213ENST00000597215 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
VRK3-213ENST00000597215 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
VRK3-213ENST00000597215 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
VRK3-213ENST00000597215 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
VRK3-213ENST00000597215 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
VRK3-213ENST00000597215 NCR2O95944 276 aa9.82□□□□□ -0.84
VRK3-213ENST00000597215 PPP1R17O96001 155 aa9.82□□□□□ -0.84
VRK3-213ENST00000597215 TTC32Q5I0X7 151 aa9.82□□□□□ -0.84
VRK3-213ENST00000597215 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
VRK3-213ENST00000597215 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
VRK3-213ENST00000597215 SMKR1H3BMG3 65 aa9.81□□□□□ -0.84
VRK3-213ENST00000597215 CKS2P33552 79 aa9.81□□□□□ -0.84
VRK3-213ENST00000597215 ST20Q9HBF5 79 aa9.81□□□□□ -0.84
VRK3-213ENST00000597215 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
VRK3-213ENST00000597215 M0R2N4 97 aa9.8□□□□□ -0.84
VRK3-213ENST00000597215 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
VRK3-213ENST00000597215 PPBPP02775 128 aa9.8□□□□□ -0.84
VRK3-213ENST00000597215 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
VRK3-213ENST00000597215 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
VRK3-213ENST00000597215 D6R8Y8 96 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 COTL1Q14019 142 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 COX19Q49B96 90 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 LINC01556Q5JQF7 62 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 Q6ZR54 194 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 NRACQ8N912 160 aa9.79□□□□□ -0.84
VRK3-213ENST00000597215 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 TRAV9-2A0A087WT02 112 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 K7EP13 123 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
VRK3-213ENST00000597215 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 I3L3M4 83 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 HLA-DQA1P01909 254 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 PMCHP20382 165 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.85
VRK3-213ENST00000597215 IQCJQ1A5X6 159 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
VRK3-213ENST00000597215 PHOX2AO14813 284 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
VRK3-213ENST00000597215 PKIAP61925 76 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 ELOBQ15370 118 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 NIT1Q86X76 327 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 C10orf126Q8N4M7 172 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 PRELID3AQ96N28 172 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 C20orf78Q9BR46 151 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 CHCHD5Q9BSY4 110 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
VRK3-213ENST00000597215 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 TRBV27A0A0K0K1C4 114 aa9.75□□□□□ -0.85
VRK3-213ENST00000597215 VCYO14598 125 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms