RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TRAV26-2A0A0B4J265 109 aa6.8□□□□□ -1.32
TPM4-216ENST00000592822 M0R2N4 97 aa6.8□□□□□ -1.32
TPM4-216ENST00000592822 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
TPM4-216ENST00000592822 Q6ZR54 194 aa6.8□□□□□ -1.32
TPM4-216ENST00000592822 GATD1Q8NB37 220 aa6.8□□□□□ -1.32
TPM4-216ENST00000592822 NBDYA0A0U1RRE5 68 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 A0A1B0GXF2 115 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 H7C1H1 209 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 SIVA1O15304 175 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 CAMPP49913 170 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 LELP1Q5T871 98 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 MRPL54Q6P161 138 aaKnown RBP6.79□□□□□ -1.32
TPM4-216ENST00000592822 WFDC10BQ8IUB3 73 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 SLC7A5P1Q8MH63 180 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 RNF185Q96GF1 192 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 DNAJC30Q96LL9 226 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 CTDSP1Q9GZU7 261 aa6.79□□□□□ -1.32
TPM4-216ENST00000592822 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 A0A1B0GW15 77 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 C7orf77A4D0Y5 90 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 GAS8-AS1O95177 125 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 RAB4AP20338 218 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 AMN1Q8IY45 258 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 KRTAP1-5Q9BYS1 174 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 NIT2Q9NQR4 276 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 TNFRSF18Q9Y5U5 241 aa6.78□□□□□ -1.32
TPM4-216ENST00000592822 A0A087WWC5 75 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 TRAV8-6A0A0B4J262 113 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 HBBP68871 147 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 OR10J3Q5JRS4 329 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 ATP5L2Q7Z4Y8 100 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 FRZBQ92765 325 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
TPM4-216ENST00000592822 IMMP2LQ96T52 175 aa6.77□□□□□ -1.33
TPM4-216ENST00000592822 APOC3P02656 99 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 S100A8P05109 93 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 RPS10P46783 165 aaKnown RBP6.76□□□□□ -1.33
TPM4-216ENST00000592822 RHEBQ15382 184 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 DAZ4Q86SG3 579 aaKnown RBP6.76□□□□□ -1.33
TPM4-216ENST00000592822 MRAP2Q96G30 205 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 DAZ3Q9NR90 486 aaKnown RBP6.76□□□□□ -1.33
TPM4-216ENST00000592822 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
TPM4-216ENST00000592822 TRBV6-8A0A0A6YYG3 113 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 NCR2O95944 276 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 NDUFA5Q16718 116 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 MRPL51Q4U2R6 128 aaKnown RBP6.75□□□□□ -1.33
TPM4-216ENST00000592822 TTC32Q5I0X7 151 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 Q8N3U1 123 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 RPS10P5Q9NQ39 176 aa6.75□□□□□ -1.33
TPM4-216ENST00000592822 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
TPM4-216ENST00000592822 KCNIP4Q6PIL6 250 aa6.74□□□□□ -1.33
TPM4-216ENST00000592822 SVBPQ8N300 66 aa6.74□□□□□ -1.33
TPM4-216ENST00000592822 NRACQ8N912 160 aa6.74□□□□□ -1.33
TPM4-216ENST00000592822 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.74□□□□□ -1.33
TPM4-216ENST00000592822 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
TPM4-216ENST00000592822 TRAV9-1A0A075B6T8 112 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 RTL8CO15255 209 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 SNAPINO95295 136 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 IGHV3-30P01768 117 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 IGHV3-33P01772 117 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 IGHV3-30-3P0DP02 117 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 IGHV3-30-5P0DP03 117 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 C1orf134Q5TEV5 83 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 URGCP-MRPS24S4R325 110 aa6.73□□□□□ -1.33
TPM4-216ENST00000592822 K7EP13 123 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 S100PP25815 95 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 CKS2P33552 79 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
TPM4-216ENST00000592822 IQCJQ1A5X6 159 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 NIT1Q86X76 327 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 FRAS1Q86XX4 4008 aa6.72□□□□□ -1.33
TPM4-216ENST00000592822 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.33
TPM4-216ENST00000592822 TRBV24-1A0A075B6N3 115 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 TRBV25-1A0A075B6N4 114 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 D6R8Y8 96 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 PMCHP20382 165 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 COTL1Q14019 142 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 ATRAIDQ6UW56 229 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 TMEM136Q6ZRR5 245 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 CHCHD5Q9BSY4 110 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
TPM4-216ENST00000592822 TRBV27A0A0K0K1C4 114 aa6.7□□□□□ -1.34
TPM4-216ENST00000592822 IBA57-AS1B1ANH7 110 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms