RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ZNF674	Q2M3X9	581 aa		11.7	□□□□□ -0.54
CIRBP-238	ENST00000592412	LINC01559	Q495D7	138 aa		11.7	□□□□□ -0.54
CIRBP-238	ENST00000592412	NEXN-AS1	Q8NBZ9	246 aa		11.7	□□□□□ -0.54
CIRBP-238	ENST00000592412	SFT2D1	Q8WV19	159 aa		11.7	□□□□□ -0.54
CIRBP-238	ENST00000592412	FAM74A7	A6NL05	159 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	ANG	P03950	147 aa	Known RBP	11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	FAM162B	Q5T6X4	162 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	DGAT2L7P	Q6IED9	249 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	PRR27	Q6MZM9	219 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	SDIM1	Q6ZPB5	146 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	SLC51B	Q86UW2	128 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	ZFP82	Q8N141	532 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	MBD3L1	Q8WWY6	194 aa		11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412	NKX6-2	Q9C056	277 aa	Predicted RBP	11.69	□□□□□ -0.54
CIRBP-238	ENST00000592412		A0A1B0GV50	99 aa		11.68	□□□□□ -0.54
CIRBP-238	ENST00000592412	NTM-AS1	Q6ZSK4	140 aa		11.68	□□□□□ -0.54
CIRBP-238	ENST00000592412	C9orf62	Q8N4C0	152 aa		11.68	□□□□□ -0.54
CIRBP-238	ENST00000592412	HIST1H2BA	Q96A08	127 aa		11.68	□□□□□ -0.54
CIRBP-238	ENST00000592412	PRR34	Q9NV39	138 aa		11.68	□□□□□ -0.54
CIRBP-238	ENST00000592412	H2AFB1	P0C5Y9	115 aa		11.67	□□□□□ -0.54
CIRBP-238	ENST00000592412	MIA	Q16674	131 aa		11.67	□□□□□ -0.54
CIRBP-238	ENST00000592412	ZFP30	Q9Y2G7	519 aa		11.67	□□□□□ -0.54
CIRBP-238	ENST00000592412	RAB5C	P51148	216 aa		11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412	RAB4B	P61018	213 aa		11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412	CIRBP	Q14011	172 aa	Known RBP	11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412	CST9LP1	Q5W188	147 aa		11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412	CLPSL2	Q6UWE3	100 aa		11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412		Q6ZRU5	148 aa		11.66	□□□□□ -0.54
CIRBP-238	ENST00000592412	CHCHD5	Q9BSY4	110 aa		11.65	□□□□□ -0.54
CIRBP-238	ENST00000592412	PAGE4	O60829	102 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	LTA	P01374	205 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	SULT1A2	P50226	295 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	RPL19	P84098	196 aa	Known RBP	11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	ZNF56	Q15929	161 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	OR10AG1	Q8NH19	301 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	FMC1	Q96HJ9	113 aa		11.64	□□□□□ -0.55
CIRBP-238	ENST00000592412	TRBV6-1	A0A0K0K1D8	114 aa		11.63	□□□□□ -0.55
CIRBP-238	ENST00000592412	RBX1	P62877	108 aa		11.63	□□□□□ -0.55
CIRBP-238	ENST00000592412	LINC00269	Q8N2A0	174 aa		11.63	□□□□□ -0.55
CIRBP-238	ENST00000592412	VAX2	Q9UIW0	290 aa		11.63	□□□□□ -0.55
CIRBP-238	ENST00000592412	NKX2-5	P52952	324 aa	Predicted RBP	11.62	□□□□□ -0.55
CIRBP-238	ENST00000592412	UBE2G1	P62253	170 aa		11.62	□□□□□ -0.55
CIRBP-238	ENST00000592412	TCEAL7	Q9BRU2	100 aa		11.62	□□□□□ -0.55
CIRBP-238	ENST00000592412	TEX46	H3BTG2	121 aa		11.61	□□□□□ -0.55
CIRBP-238	ENST00000592412	SLPI	P03973	132 aa		11.61	□□□□□ -0.55
CIRBP-238	ENST00000592412	CNBP	P62633	177 aa	Known RBP	11.61	□□□□□ -0.55
CIRBP-238	ENST00000592412	TRAV1-1	A0A0B4J248	108 aa		11.6	□□□□□ -0.55
CIRBP-238	ENST00000592412	PKIA	P61925	76 aa		11.6	□□□□□ -0.55
CIRBP-238	ENST00000592412	CCL20	P78556	96 aa		11.6	□□□□□ -0.55
CIRBP-238	ENST00000592412	GAGE6	Q13070	117 aa		11.6	□□□□□ -0.55
CIRBP-238	ENST00000592412	GNG13	Q9P2W3	67 aa		11.6	□□□□□ -0.55
CIRBP-238	ENST00000592412	MUC21	A0A0G2JKD1	596 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	MUC21	A0A140T8X8	626 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	SNAI2	O43623	268 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	CHTF8	P0CG12	524 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	MANBAL	Q9NQG1	85 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	KIF25-AS1	Q9Y6Z4	181 aa		11.59	□□□□□ -0.55
CIRBP-238	ENST00000592412	IGLV10-54	A0A075B6I4	117 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412		A0A087WYN8	130 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412	AKR1C3	P42330	323 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412	ALKAL2	Q6UX46	152 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412	CLRN3	Q8NCR9	226 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412	DERL1	Q9BUN8	251 aa		11.58	□□□□□ -0.56
CIRBP-238	ENST00000592412	CXCL1	P09341	107 aa		11.57	□□□□□ -0.56
CIRBP-238	ENST00000592412	ODF1	Q14990	250 aa		11.57	□□□□□ -0.56
CIRBP-238	ENST00000592412	C20orf203	Q8NBC4	194 aa		11.57	□□□□□ -0.56
CIRBP-238	ENST00000592412	SPACA4	Q8TDM5	124 aa		11.57	□□□□□ -0.56
CIRBP-238	ENST00000592412	SCO2	A0A1W2PP80	73 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	REG3A	Q06141	175 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	IQCJ	Q1A5X6	159 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	TMEM97	Q5BJF2	176 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	MLST8	Q9BVC4	326 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	GFRA4	Q9GZZ7	299 aa		11.56	□□□□□ -0.56
CIRBP-238	ENST00000592412	TRBV25-1	A0A075B6N4	114 aa		11.55	□□□□□ -0.56
CIRBP-238	ENST00000592412	hDV102S1	A0JD36	115 aa		11.55	□□□□□ -0.56
CIRBP-238	ENST00000592412		F5H697	171 aa		11.55	□□□□□ -0.56
CIRBP-238	ENST00000592412	S100A9	P06702	114 aa	Known RBP	11.55	□□□□□ -0.56
CIRBP-238	ENST00000592412	OR5AL1	P0C617	328 aa		11.55	□□□□□ -0.56
CIRBP-238	ENST00000592412	IFNA1	P01562	189 aa		11.54	□□□□□ -0.56
CIRBP-238	ENST00000592412	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.54	□□□□□ -0.56
CIRBP-238	ENST00000592412	RNF185	Q96GF1	192 aa		11.54	□□□□□ -0.56
CIRBP-238	ENST00000592412	IGLV4-60	A0A075B6I1	120 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	IGHV3-64	A0A075B6Q5	118 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	PHOX2A	O14813	284 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	SST	P61278	116 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	SPANXN1	Q5VSR9	72 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	PLAC8	Q9NZF1	115 aa		11.53	□□□□□ -0.56
CIRBP-238	ENST00000592412	IGHV1-24	A0A0C4DH33	117 aa		11.52	□□□□□ -0.57
CIRBP-238	ENST00000592412	BLOC1S1	P78537	153 aa		11.52	□□□□□ -0.57
CIRBP-238	ENST00000592412		M0QY20	66 aa		11.51	□□□□□ -0.57
CIRBP-238	ENST00000592412	BCL2	P10415	239 aa		11.51	□□□□□ -0.57
CIRBP-238	ENST00000592412	MEF2B	Q02080	365 aa	Predicted RBP	11.51	□□□□□ -0.57
CIRBP-238	ENST00000592412	C11orf52	Q96A22	123 aa		11.51	□□□□□ -0.57
CIRBP-238	ENST00000592412	TRAV8-4	A0A0B4J246	113 aa		11.5	□□□□□ -0.57
CIRBP-238	ENST00000592412		P01737	135 aa		11.5	□□□□□ -0.57
CIRBP-238	ENST00000592412	RPL35	P42766	123 aa	Known RBP	11.5	□□□□□ -0.57
CIRBP-238	ENST00000592412	BAGE2	Q86Y30	109 aa		11.5	□□□□□ -0.57
CIRBP-238	ENST00000592412	LINC01600	Q96MT4	127 aa		11.5	□□□□□ -0.57
CIRBP-238	ENST00000592412	AP1S3	Q96PC3	154 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 125 ms