RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
SMARCA4-216ENST00000591545 LY6G6DO95868 133 aa10.21□□□□□ -0.77
SMARCA4-216ENST00000591545 TAX1BP3O14907 124 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 FXYD2P54710 66 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 JMJD7-PLA2G4BH0Y9G9 81 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 CXCL5P42830 114 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 UBE2BP63146 152 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 MSRB1Q9NZV6 116 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 FREM1Q5H8C1 2179 aa10.21□□□□□ -0.78
SMARCA4-216ENST00000591545 COX7A2LO14548 114 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 Q6ZQT7 251 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 SMIM20Q8N5G0 67 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 PCNX3Q9H6A9 2034 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 C11orf1Q9H5F2 150 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 EML6Q6ZMW3 1958 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 ETDCA0A1B0GVM5 59 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 TEX22C9J3V5 150 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 TNCP24821 2201 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 TRBV10-2A0A0K0K1G8 114 aa10.2□□□□□ -0.78
SMARCA4-216ENST00000591545 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
SMARCA4-216ENST00000591545 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
SMARCA4-216ENST00000591545 TDRG1Q3Y452 100 aa10.19□□□□□ -0.78
SMARCA4-216ENST00000591545 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
SMARCA4-216ENST00000591545 TM2D2Q9BX73 214 aa10.19□□□□□ -0.78
SMARCA4-216ENST00000591545 NAV3Q8IVL0 2385 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 C19orf71A6NCJ1 209 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 FOXI1Q12951 378 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 C10orf142B7Z368 130 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 ODF1Q14990 250 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 CAMK2N2Q96S95 79 aa10.18□□□□□ -0.78
SMARCA4-216ENST00000591545 DSCAMO60469 2012 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 ODF3L1Q8IXM7 274 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 ZNF503Q96F45 646 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 DYSFO75923 2080 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 C11orf71Q6IPW1 123 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 KMT2EQ8IZD2 1858 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 C22orf34Q6ZV56 151 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 VSIG2Q96IQ7 327 aa10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 MRPL36Q9P0J6 103 aaKnown RBP10.17□□□□□ -0.78
SMARCA4-216ENST00000591545 PSMB8P28062 276 aa10.16□□□□□ -0.78
SMARCA4-216ENST00000591545 IGLV2-14P01704 120 aa10.16□□□□□ -0.78
SMARCA4-216ENST00000591545 WFDC2Q14508 124 aa10.16□□□□□ -0.78
SMARCA4-216ENST00000591545 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
SMARCA4-216ENST00000591545 Q8N1Y9 231 aa10.16□□□□□ -0.78
SMARCA4-216ENST00000591545 A0A1B0GX51 115 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 MP68P56378 58 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 J3KT08 172 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 PDE6GP18545 87 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 G3V4G9 280 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 SPRY2O43597 315 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 IGHV3-30P01768 117 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 IGHV3-33P01772 117 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 ESM1Q9NQ30 184 aa10.15□□□□□ -0.78
SMARCA4-216ENST00000591545 PRAC2D3DTV9 90 aa10.15□□□□□ -0.79
SMARCA4-216ENST00000591545 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 FAM236AA0A1B0GUQ0 79 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 FAM236BA0A1B0GV22 79 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 LGALS9O00182 355 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 P0C879 139 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 RS1O15537 224 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 NDUFA1O15239 70 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 IGF1P05019 195 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 Q6ZSV7 163 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 NDUFB1O75438 58 aa10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
SMARCA4-216ENST00000591545 NDUFC2O95298 119 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 NREPQ16612 68 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 DEFB4AO15263 64 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 NUP210LQ5VU65 1888 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 LRP4O75096 1905 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 FANCD2OSQ96PS1 177 aa10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 NCOA6Q14686 2063 aaPredicted RBP10.13□□□□□ -0.79
SMARCA4-216ENST00000591545 TRBV10-1A0A0K0K1A3 114 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 NDUFS5O43920 106 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 UNQ9165/PRO28630Q6UXU0 137 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 TRBV12-3P01733 135 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 RPL18AQ02543 176 aaKnown RBP10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
SMARCA4-216ENST00000591545 ABCA2Q9BZC7 2435 aa10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 TNRC6AQ8NDV7 1962 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 CEP192Q8TEP8 1941 aa10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 IGKV3D-7A0A0C4DH55 119 aa10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 TIRAPP58753 221 aa10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 HILS1P60008 231 aa10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-216ENST00000591545 TMEM256-PLSCR3K7ERE1 68 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms