RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
CROCCP3-205ENST00000591316 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
CROCCP3-205ENST00000591316 ESRGQ1W209 222 aa12.71□□□□□ -0.37
CROCCP3-205ENST00000591316 RASL11AQ6T310 242 aa12.71□□□□□ -0.37
CROCCP3-205ENST00000591316 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
CROCCP3-205ENST00000591316 TRBV7-3A0A075B6L6 115 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 TGIF2-C20orf24A0A0A6YYL0 155 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 MRPL51Q4U2R6 128 aaKnown RBP12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 TENM2Q9NT68 2774 aa12.7□□□□□ -0.38
CROCCP3-205ENST00000591316 LY6G6CO95867 125 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 CCL18P55774 89 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 ELOBQ15370 118 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 LYPD5Q6UWN5 251 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 UBE2DNLQ8IWF7 75 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 NCR2O95944 276 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 CBLN2Q8IUK8 224 aa12.69□□□□□ -0.38
CROCCP3-205ENST00000591316 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
CROCCP3-205ENST00000591316 SMCO4Q9NRQ5 59 aa12.68□□□□□ -0.38
CROCCP3-205ENST00000591316 CKS2P33552 79 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 SH2D6Q7Z4S9 175 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 DEFB104AQ8WTQ1 72 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 DNAJC30Q96LL9 226 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 LINC00588Q9Y4M8 146 aa12.67□□□□□ -0.38
CROCCP3-205ENST00000591316 RPS10P46783 165 aaKnown RBP12.66□□□□□ -0.38
CROCCP3-205ENST00000591316 UBE2D3P61077 147 aa12.66□□□□□ -0.38
CROCCP3-205ENST00000591316 UBE2D2P62837 147 aa12.66□□□□□ -0.38
CROCCP3-205ENST00000591316 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
CROCCP3-205ENST00000591316 TMEM136Q6ZRR5 245 aa12.66□□□□□ -0.38
CROCCP3-205ENST00000591316 LINC00694P0DN24 101 aa12.65□□□□□ -0.38
CROCCP3-205ENST00000591316 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
CROCCP3-205ENST00000591316 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
CROCCP3-205ENST00000591316 D6R8Y8 96 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 SCO1O75880 301 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 FRZBQ92765 325 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 LYSTQ99698 3801 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 GNB1LQ9BYB4 327 aa12.64□□□□□ -0.39
CROCCP3-205ENST00000591316 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
CROCCP3-205ENST00000591316 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
CROCCP3-205ENST00000591316 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
CROCCP3-205ENST00000591316 APCSP02743 223 aa12.62□□□□□ -0.39
CROCCP3-205ENST00000591316 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
CROCCP3-205ENST00000591316 YPEL4Q96NS1 127 aa12.62□□□□□ -0.39
CROCCP3-205ENST00000591316 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
CROCCP3-205ENST00000591316 SDHAF1A6NFY7 115 aa12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 HLA-DQA1P01909 254 aa12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 S100A1P23297 94 aa12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 ORMDL3Q8N138 153 aa12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 NRACQ8N912 160 aa12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 KMT2CQ8NEZ4 4911 aaKnown RBP12.61□□□□□ -0.39
CROCCP3-205ENST00000591316 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 COX19Q49B96 90 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 PPP1R17O96001 155 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 PPBPP02775 128 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 FABP9Q0Z7S8 132 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 PRELID3AQ96N28 172 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
CROCCP3-205ENST00000591316 TRBV6-5A0A0K0K1A5 114 aa12.59□□□□□ -0.39
CROCCP3-205ENST00000591316 NPYP01303 97 aa12.59□□□□□ -0.39
CROCCP3-205ENST00000591316 PMCHP20382 165 aa12.59□□□□□ -0.39
CROCCP3-205ENST00000591316 Q9H8V8 135 aa12.59□□□□□ -0.39
CROCCP3-205ENST00000591316 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
CROCCP3-205ENST00000591316 LELP1Q5T871 98 aa12.58□□□□□ -0.4
CROCCP3-205ENST00000591316 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
CROCCP3-205ENST00000591316 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 LCE6AA0A183 80 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 MT-ND6P03923 174 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 TIRAPP58753 221 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 NTM-AS1Q6ZSK4 140 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
CROCCP3-205ENST00000591316 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 I3L3M4 83 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 POLR2KP53803 58 aaKnown RBP12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 VCYO14598 125 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 COTL1Q14019 142 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
CROCCP3-205ENST00000591316 SIVA1O15304 175 aa12.55□□□□□ -0.4
CROCCP3-205ENST00000591316 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
CROCCP3-205ENST00000591316 VPS13DQ5THJ4 4388 aa12.54□□□□□ -0.4
CROCCP3-205ENST00000591316 COLCA2A8K830 154 aa12.54□□□□□ -0.4
CROCCP3-205ENST00000591316 TMEM262E9PQX1 116 aa12.54□□□□□ -0.4
CROCCP3-205ENST00000591316 M0R2N4 97 aa12.54□□□□□ -0.4
CROCCP3-205ENST00000591316 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
CROCCP3-205ENST00000591316 TRBV25-1A0A075B6N4 114 aa12.53□□□□□ -0.4
CROCCP3-205ENST00000591316 PHOX2AO14813 284 aa12.53□□□□□ -0.4
CROCCP3-205ENST00000591316 CHCHD5Q9BSY4 110 aa12.53□□□□□ -0.4
CROCCP3-205ENST00000591316 IGHV1-24A0A0C4DH33 117 aa12.52□□□□□ -0.4
CROCCP3-205ENST00000591316 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms