RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 FAM229AH3BQW9 127 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 EIF4EBP1Q13541 118 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-212ENST00000591126 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 UNC80Q8N2C7 3258 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 C5orf42Q9H799 3197 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 WDR87Q6ZQQ6 2873 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 ATRXP46100 2492 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 BEAN1Q3B7T3 259 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SUMO4Q6EEV6 95 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 TIMM17AQ99595 171 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 LAMTOR3Q9UHA4 124 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SPATA45Q537H7 98 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 A0A1B0GVG6 124 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 H7C2G1 150 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 EGR2P11161 476 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-212ENST00000591126 MRPL51Q4U2R6 128 aaKnown RBP4.66□□□□□ -1.66
SMAD4-212ENST00000591126 BVES-AS1Q5T3Y7 98 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 NTN5Q8WTR8 489 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-212ENST00000591126 DEFB4AO15263 64 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 CTRLP40313 264 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 CD300CQ08708 224 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 EML6Q6ZMW3 1958 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 IGHV4-4A0A075B6R2 117 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 IGLV5-52A0A0A0MRZ9 124 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 PATE2Q6UY27 113 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 PRRC2AP48634 2157 aaKnown RBP4.66□□□□□ -1.66
SMAD4-212ENST00000591126 COX7B2Q8TF08 81 aa4.66□□□□□ -1.66
SMAD4-212ENST00000591126 IGLV4-69A0A075B6H9 119 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 ESM1Q9NQ30 184 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 IGF2RP11717 2491 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 IGLV2-14P01704 120 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.66
SMAD4-212ENST00000591126 ASPHD1Q5U4P2 390 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 ZNF479Q96JC4 524 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 SSBP4Q9BWG4 385 aaPredicted RBP4.65□□□□□ -1.66
SMAD4-212ENST00000591126 DKK2Q9UBU2 259 aa4.65□□□□□ -1.66
SMAD4-212ENST00000591126 CPAMD8Q8IZJ3 1885 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 VCANP13611 3396 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 A8MZ25 164 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 NDUFB1O75438 58 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 SYCNQ0VAF6 134 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 Q6ZTI0 123 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 ABCA1O95477 2261 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 G3V4G9 280 aa4.65□□□□□ -1.67
SMAD4-212ENST00000591126 C1orf229Q6ZS94 237 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-212ENST00000591126 F8VRH5 84 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 GATD1Q8NB37 220 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 Q5BKY6 102 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 DCANP1Q8TF63 244 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 FAM167A-AS1Q96KT0 104 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 TRIOO75962 3097 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 TRANK1O15050 2925 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 PLA2G1BP04054 148 aaKnown RBP4.64□□□□□ -1.67
SMAD4-212ENST00000591126 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 GAGE10A6NGK3 116 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 GTSF1Q8WW33 167 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 Q9H8V8 135 aa4.64□□□□□ -1.67
SMAD4-212ENST00000591126 KLLNB2CW77 178 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 H0YGX0 51 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 HSD52Q0P140 79 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 RBMY1FQ15415 496 aaKnown RBP4.63□□□□□ -1.67
SMAD4-212ENST00000591126 ODF3L2Q3SX64 289 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 SPANXDQ9BXN6 97 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 SPTBN4Q9H254 2564 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 PFN2P35080 140 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 IGKV1D-37A0A075B6S9 117 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 COL5A1-AS1Q5SY13 56 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 SCRT2Q9NQ03 307 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 SAMD5Q5TGI4 173 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 ZFAND2AQ8N6M9 145 aa4.63□□□□□ -1.67
SMAD4-212ENST00000591126 A0A1B0GV72 72 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 FUSP35637 526 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMAD4-212ENST00000591126 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 GATA1P15976 413 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-212ENST00000591126 RPL28P46779 137 aaKnown RBP4.62□□□□□ -1.67
SMAD4-212ENST00000591126 CD164L2Q6UWJ8 174 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 EYSQ5T1H1 3165 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 SNAI2O43623 268 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 PROP1O75360 226 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 ESDP10768 282 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 CFAP126Q5VTH2 177 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 RNASE8Q8TDE3 154 aaKnown RBP4.62□□□□□ -1.67
SMAD4-212ENST00000591126 CHD8Q9HCK8 2581 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 KIAA2026Q5HYC2 2103 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 C19orf71A6NCJ1 209 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 CLPSL2Q6UWE3 100 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 C10orf99Q6UWK7 81 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 CHCHD10Q8WYQ3 142 aaPredicted RBP4.62□□□□□ -1.67
SMAD4-212ENST00000591126 V9GYV3 84 aa4.62□□□□□ -1.67
SMAD4-212ENST00000591126 TRAV12-1A0A0B4J245 112 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 TRAV26-2A0A0B4J265 109 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 C5orf38Q86SI9 138 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms