RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
DDX39A-213ENST00000590315 TRBV7-3A0A075B6L6 115 aa8.9□□□□□ -0.98
DDX39A-213ENST00000590315 A0A087WWC5 75 aa8.9□□□□□ -0.98
DDX39A-213ENST00000590315 ATP5L2Q7Z4Y8 100 aa8.9□□□□□ -0.98
DDX39A-213ENST00000590315 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
DDX39A-213ENST00000590315 PLECQ15149 4684 aaKnown RBP8.9□□□□□ -0.98
DDX39A-213ENST00000590315 IGLV2-18A0A075B6J9 118 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 M0QY20 66 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 NCR2O95944 276 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
DDX39A-213ENST00000590315 A0A1B0GXF2 115 aa8.88□□□□□ -0.99
DDX39A-213ENST00000590315 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
DDX39A-213ENST00000590315 RPL39LQ96EH5 51 aaKnown RBP8.88□□□□□ -0.99
DDX39A-213ENST00000590315 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
DDX39A-213ENST00000590315 GTSF1LQ9H1H1 148 aa8.88□□□□□ -0.99
DDX39A-213ENST00000590315 NIT2Q9NQR4 276 aa8.88□□□□□ -0.99
DDX39A-213ENST00000590315 MRPS16Q9Y3D3 137 aaKnown RBP8.88□□□□□ -0.99
DDX39A-213ENST00000590315 TRAV8-6A0A0B4J262 113 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 RAB4AP20338 218 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 UBE2D3P61077 147 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 UBE2D2P62837 147 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 TMEM242Q9NWH2 141 aa8.87□□□□□ -0.99
DDX39A-213ENST00000590315 LYSTQ99698 3801 aa8.86□□□□□ -0.99
DDX39A-213ENST00000590315 TRAV9-1A0A075B6T8 112 aa8.86□□□□□ -0.99
DDX39A-213ENST00000590315 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
DDX39A-213ENST00000590315 CKS2P33552 79 aa8.86□□□□□ -0.99
DDX39A-213ENST00000590315 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
DDX39A-213ENST00000590315 DEFB104AQ8WTQ1 72 aa8.86□□□□□ -0.99
DDX39A-213ENST00000590315 M0R2N4 97 aa8.85□□□□□ -0.99
DDX39A-213ENST00000590315 WFDC10BQ8IUB3 73 aa8.85□□□□□ -0.99
DDX39A-213ENST00000590315 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
DDX39A-213ENST00000590315 D6R8Y8 96 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 SIVA1O15304 175 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 LELP1Q5T871 98 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 ATRAIDQ6UW56 229 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 DAZ4Q86SG3 579 aaKnown RBP8.84□□□□□ -0.99
DDX39A-213ENST00000590315 FRZBQ92765 325 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 Q9H8V8 135 aa8.84□□□□□ -0.99
DDX39A-213ENST00000590315 DAZ3Q9NR90 486 aaKnown RBP8.84□□□□□ -0.99
DDX39A-213ENST00000590315 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
DDX39A-213ENST00000590315 PMCHP20382 165 aa8.83□□□□□ -1
DDX39A-213ENST00000590315 RPS10P46783 165 aaKnown RBP8.83□□□□□ -1
DDX39A-213ENST00000590315 TIRAPP58753 221 aa8.83□□□□□ -1
DDX39A-213ENST00000590315 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
DDX39A-213ENST00000590315 UPK3BQ9BT76 320 aa8.83□□□□□ -1
DDX39A-213ENST00000590315 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 PPP1R17O96001 155 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 IGHV3-30P01768 117 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 IGHV3-33P01772 117 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 COTL1Q14019 142 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 ORMDL3Q8N138 153 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
DDX39A-213ENST00000590315 TRBV25-1A0A075B6N4 114 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 IGHV1-24A0A0C4DH33 117 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 TMEM262E9PQX1 116 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 HLA-DQA1P01909 254 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 APCSP02743 223 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 AMTP48728 403 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 ELOBQ15370 118 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 COX19Q49B96 90 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 PRELID3AQ96N28 172 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 SMCO4Q9NRQ5 59 aa8.81□□□□□ -1
DDX39A-213ENST00000590315 DNAH1Q9P2D7 4330 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 I3L3M4 83 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 UBE2L6O14933 153 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 TNFRSF6BO95407 300 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 NPYP01303 97 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 PPBPP02775 128 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 KIAA1644Q3SXP7 199 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 TTC32Q5I0X7 151 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 NRACQ8N912 160 aa8.8□□□□□ -1
DDX39A-213ENST00000590315 A0A087WX48 190 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 FCER1GP30273 86 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 SUMO2P61956 95 aaKnown RBP8.79□□□□□ -1
DDX39A-213ENST00000590315 GAGE6Q13070 117 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 TMEM243Q9BU79 118 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
DDX39A-213ENST00000590315 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
DDX39A-213ENST00000590315 TRAV9-2A0A087WT02 112 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 LOC389332A0A1B0GUA5 103 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 MT-ND6P03923 174 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 FABP9Q0Z7S8 132 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
DDX39A-213ENST00000590315 HYDINQ4G0P3 5121 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms