RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CACNG7P62955 275 aa12.03□□□□□ -0.48
CIRBP-227ENST00000590188 LAGE3Q14657 143 aa12.03□□□□□ -0.48
CIRBP-227ENST00000590188 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
CIRBP-227ENST00000590188 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
CIRBP-227ENST00000590188 KRTAP4-5Q9BYR2 181 aa12.03□□□□□ -0.48
CIRBP-227ENST00000590188 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.49
CIRBP-227ENST00000590188 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.49
CIRBP-227ENST00000590188 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
CIRBP-227ENST00000590188 A0A087WX48 190 aa12.01□□□□□ -0.49
CIRBP-227ENST00000590188 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
CIRBP-227ENST00000590188 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
CIRBP-227ENST00000590188 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
CIRBP-227ENST00000590188 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
CIRBP-227ENST00000590188 EIF5A2Q9GZV4 153 aaKnown RBP12.01□□□□□ -0.49
CIRBP-227ENST00000590188 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 F2Z2F3 143 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 TMEM250H0YL14 139 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 LECT2O14960 151 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 NTF3P20783 257 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 KRTAP10-1P60331 282 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 WFDC2Q14508 124 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 TM2D2Q9BX73 214 aa12□□□□□ -0.49
CIRBP-227ENST00000590188 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-227ENST00000590188 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
CIRBP-227ENST00000590188 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
CIRBP-227ENST00000590188 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 TWIST1Q15672 202 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 Q8N814 137 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
CIRBP-227ENST00000590188 M0QY20 66 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 CTRLP40313 264 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 MPV17L2Q567V2 206 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 DEFB104AQ8WTQ1 72 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 DPH3P1Q9H4G8 78 aa11.97□□□□□ -0.49
CIRBP-227ENST00000590188 GCSHP23434 173 aa11.96□□□□□ -0.49
CIRBP-227ENST00000590188 C15orf54Q8N8G6 183 aa11.96□□□□□ -0.49
CIRBP-227ENST00000590188 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
CIRBP-227ENST00000590188 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
CIRBP-227ENST00000590188 H7C1H1 209 aa11.95□□□□□ -0.5
CIRBP-227ENST00000590188 GAGE6Q13070 117 aa11.95□□□□□ -0.5
CIRBP-227ENST00000590188 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
CIRBP-227ENST00000590188 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
CIRBP-227ENST00000590188 SRP19P09132 144 aaKnown RBP11.94□□□□□ -0.5
CIRBP-227ENST00000590188 HAMPP81172 84 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 ELOBQ15370 118 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 Q8N976 141 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 RMI2Q96E14 147 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 DNAH8Q96JB1 4490 aa11.94□□□□□ -0.5
CIRBP-227ENST00000590188 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.93□□□□□ -0.5
CIRBP-227ENST00000590188 TRAV26-2A0A0B4J265 109 aa11.93□□□□□ -0.5
CIRBP-227ENST00000590188 ZNF727A8MUV8 499 aa11.93□□□□□ -0.5
CIRBP-227ENST00000590188 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
CIRBP-227ENST00000590188 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
CIRBP-227ENST00000590188 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 CRPP02741 224 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
CIRBP-227ENST00000590188 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 Q8N1X5 172 aa11.92□□□□□ -0.5
CIRBP-227ENST00000590188 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
CIRBP-227ENST00000590188 XGP55808 180 aa11.91□□□□□ -0.5
CIRBP-227ENST00000590188 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
CIRBP-227ENST00000590188 LINC01551Q86U37 167 aa11.91□□□□□ -0.5
CIRBP-227ENST00000590188 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
CIRBP-227ENST00000590188 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
CIRBP-227ENST00000590188 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
CIRBP-227ENST00000590188 A8MWL6 223 aa11.9□□□□□ -0.5
CIRBP-227ENST00000590188 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
CIRBP-227ENST00000590188 RBX1P62877 108 aa11.89□□□□□ -0.51
CIRBP-227ENST00000590188 Q0VG73 95 aa11.89□□□□□ -0.51
CIRBP-227ENST00000590188 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
CIRBP-227ENST00000590188 GATD1Q8NB37 220 aa11.89□□□□□ -0.51
CIRBP-227ENST00000590188 C1orf43Q9BWL3 253 aa11.89□□□□□ -0.51
CIRBP-227ENST00000590188 FAT1Q14517 4588 aa11.88□□□□□ -0.51
CIRBP-227ENST00000590188 PKIAP61925 76 aa11.88□□□□□ -0.51
CIRBP-227ENST00000590188 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
CIRBP-227ENST00000590188 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
CIRBP-227ENST00000590188 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
CIRBP-227ENST00000590188 C9JQL5 133 aa11.87□□□□□ -0.51
CIRBP-227ENST00000590188 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
CIRBP-227ENST00000590188 CT83Q5H943 113 aa11.87□□□□□ -0.51
CIRBP-227ENST00000590188 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
CIRBP-227ENST00000590188 NDUFS6O75380 124 aaKnown RBP11.86□□□□□ -0.51
CIRBP-227ENST00000590188 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
CIRBP-227ENST00000590188 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
CIRBP-227ENST00000590188 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
CIRBP-227ENST00000590188 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
CIRBP-227ENST00000590188 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
CIRBP-227ENST00000590188 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
CIRBP-227ENST00000590188 COTL1Q14019 142 aa11.85□□□□□ -0.51
CIRBP-227ENST00000590188 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms