RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 IGHV3-30P01768 117 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 CXCL5P42830 114 aa11.15□□□□□ -0.63
SMARCA4-214ENST00000589677 PIP4P1Q86T03 277 aa11.15□□□□□ -0.63
SMARCA4-214ENST00000589677 TRBV12-3P01733 135 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 COX7CP15954 63 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 J3QLI3 93 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 CRIP1P50238 77 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 INSL3P51460 131 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 V9GYY9 64 aa11.14□□□□□ -0.63
SMARCA4-214ENST00000589677 PKDREJQ9NTG1 2253 aa11.13□□□□□ -0.63
SMARCA4-214ENST00000589677 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
SMARCA4-214ENST00000589677 ZNF106Q9H2Y7 1883 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-214ENST00000589677 PRB1P04280 392 aa11.13□□□□□ -0.63
SMARCA4-214ENST00000589677 DOCK10Q96BY6 2186 aa11.13□□□□□ -0.63
SMARCA4-214ENST00000589677 DEFB105AQ8NG35 78 aa11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 SVIPQ8NHG7 77 aa11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 FAM240AA0A1B0GVK7 77 aa11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 GNLYP22749 145 aa11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
SMARCA4-214ENST00000589677 PSCAO43653 123 aa11.11□□□□□ -0.63
SMARCA4-214ENST00000589677 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
SMARCA4-214ENST00000589677 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
SMARCA4-214ENST00000589677 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
SMARCA4-214ENST00000589677 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
SMARCA4-214ENST00000589677 LTBP2Q14767 1821 aa11.1□□□□□ -0.63
SMARCA4-214ENST00000589677 IGFL2Q6UWQ7 119 aa11.1□□□□□ -0.63
SMARCA4-214ENST00000589677 A0A096LPF7 62 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 TNRC6BQ9UPQ9 1833 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 DKK4Q9UBT3 224 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 NCKAP5O14513 1909 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 NDUFC1O43677 76 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 LINC00308Q8TCZ7 52 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 LST1O00453 97 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 APOC4P55056 127 aa11.09□□□□□ -0.63
SMARCA4-214ENST00000589677 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.63
SMARCA4-214ENST00000589677 TIMM17BO60830 172 aa11.08□□□□□ -0.63
SMARCA4-214ENST00000589677 DIRC1Q969H9 104 aa11.08□□□□□ -0.63
SMARCA4-214ENST00000589677 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 RMI2Q96E14 147 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 NCR3O14931 201 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 Q6ZQT7 251 aa11.08□□□□□ -0.64
SMARCA4-214ENST00000589677 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 ETDCA0A1B0GVM5 59 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 M0QXV9 152 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 Q8N7P7 452 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 IGHV4-28A0A0C4DH34 117 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 A0A0J9YX75 114 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 USP17L23D6RBM5 183 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 J3QKU1 62 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 NDUFA1O15239 70 aa11.07□□□□□ -0.64
SMARCA4-214ENST00000589677 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 FAM110AQ9BQ89 295 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 ENHOQ6UWT2 76 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 SPRY4Q9C004 299 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 NRACQ8N912 160 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
SMARCA4-214ENST00000589677 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 GYPEP15421 78 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 TMEM263Q8WUH6 116 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 DEFB1P60022 68 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
SMARCA4-214ENST00000589677 COL6A6A6NMZ7 2263 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 MSMPQ1L6U9 139 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 TIRAPP58753 221 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 NDUFS5O43920 106 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
SMARCA4-214ENST00000589677 A0A0U1RQV1 116 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 CADP27708 2225 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 UBE2BP63146 152 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 IGF2-ASQ6U949 168 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 PYGO1Q9Y3Y4 419 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 H7C423 109 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 TRBV6-5A0A0K0K1A5 114 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 TRBV27A0A0K0K1C4 114 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
SMARCA4-214ENST00000589677 KIF26AQ9ULI4 1882 aaPredicted RBP11.02□□□□□ -0.64
SMARCA4-214ENST00000589677 BPY2O14599 106 aa11.02□□□□□ -0.65
SMARCA4-214ENST00000589677 NDUFB1O75438 58 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms