RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 CCL20P78556 96 aa13.8□□□□□ -0.2
NEDD4L-225ENST00000589054 DERL1Q9BUN8 251 aa13.8□□□□□ -0.2
NEDD4L-225ENST00000589054 USP17L23D6RBM5 183 aa13.79□□□□□ -0.2
NEDD4L-225ENST00000589054 ANGP03950 147 aaKnown RBP13.79□□□□□ -0.2
NEDD4L-225ENST00000589054 PRSS1P07477 247 aa13.79□□□□□ -0.2
NEDD4L-225ENST00000589054 TMUB2Q71RG4 321 aa13.79□□□□□ -0.2
NEDD4L-225ENST00000589054 S100A9P06702 114 aaKnown RBP13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 GZMBP10144 247 aa13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 ZNF345Q14585 488 aa13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 KCNIP4Q6PIL6 250 aa13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 VAX2Q9UIW0 290 aa13.78□□□□□ -0.2
NEDD4L-225ENST00000589054 F5H697 171 aa13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 PANO1I0J062 215 aa13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 SPANXN1Q5VSR9 72 aa13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 CLPSL2Q6UWE3 100 aa13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 PRR34Q9NV39 138 aa13.77□□□□□ -0.21
NEDD4L-225ENST00000589054 UMAD1C9J7I0 102 aa13.76□□□□□ -0.21
NEDD4L-225ENST00000589054 IGLV2-8P01709 118 aa13.76□□□□□ -0.21
NEDD4L-225ENST00000589054 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
NEDD4L-225ENST00000589054 RBX1P62877 108 aa13.76□□□□□ -0.21
NEDD4L-225ENST00000589054 GAGE6Q13070 117 aa13.76□□□□□ -0.21
NEDD4L-225ENST00000589054 HLA-DQA1P01909 254 aa13.75□□□□□ -0.21
NEDD4L-225ENST00000589054 CRPP02741 224 aa13.75□□□□□ -0.21
NEDD4L-225ENST00000589054 H2AFB1P0C5Y9 115 aa13.75□□□□□ -0.21
NEDD4L-225ENST00000589054 HMSDA8MTL9 139 aa13.74□□□□□ -0.21
NEDD4L-225ENST00000589054 BCL2L11O43521 198 aa13.74□□□□□ -0.21
NEDD4L-225ENST00000589054 LINC00269Q8N2A0 174 aa13.74□□□□□ -0.21
NEDD4L-225ENST00000589054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.74□□□□□ -0.21
NEDD4L-225ENST00000589054 UBR4Q5T4S7 5183 aa13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 M0QY20 66 aa13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 PFDN1O60925 122 aa13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 IGLC6P0CF74 106 aa13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 C14orf177Q52M58 125 aa13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
NEDD4L-225ENST00000589054 MIAQ16674 131 aa13.72□□□□□ -0.21
NEDD4L-225ENST00000589054 C11orf52Q96A22 123 aa13.72□□□□□ -0.21
NEDD4L-225ENST00000589054 RAB19A4D1S5 217 aa13.71□□□□□ -0.21
NEDD4L-225ENST00000589054 C9orf163Q8N9P6 203 aa13.71□□□□□ -0.21
NEDD4L-225ENST00000589054 GFRA4Q9GZZ7 299 aa13.71□□□□□ -0.21
NEDD4L-225ENST00000589054 A0A0D9SG52 128 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 IQCJQ1A5X6 159 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 SUMO4Q6EEV6 95 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 GNG13Q9P2W3 67 aa13.7□□□□□ -0.22
NEDD4L-225ENST00000589054 CENPWQ5EE01 88 aa13.69□□□□□ -0.22
NEDD4L-225ENST00000589054 SDIM1Q6ZPB5 146 aa13.69□□□□□ -0.22
NEDD4L-225ENST00000589054 AP1S3Q96PC3 154 aa13.69□□□□□ -0.22
NEDD4L-225ENST00000589054 TPPP3Q9BW30 176 aa13.69□□□□□ -0.22
NEDD4L-225ENST00000589054 IGLV10-54A0A075B6I4 117 aa13.68□□□□□ -0.22
NEDD4L-225ENST00000589054 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
NEDD4L-225ENST00000589054 OXTP01178 125 aa13.68□□□□□ -0.22
NEDD4L-225ENST00000589054 MGPP08493 103 aa13.68□□□□□ -0.22
NEDD4L-225ENST00000589054 IGLV4-60A0A075B6I1 120 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 TRBV25-1A0A075B6N4 114 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 SLPIP03973 132 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 SMIM17P0DL12 118 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 RPL37AP61513 92 aaKnown RBP13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 DGAT2L7PQ6IED9 249 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 FER1L6-AS1Q8NA97 138 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 OR2D3Q8NGH3 330 aa13.67□□□□□ -0.22
NEDD4L-225ENST00000589054 TRBV20OR9-2A0A075B6H5 130 aa13.66□□□□□ -0.22
NEDD4L-225ENST00000589054 TRAV1-1A0A0B4J248 108 aa13.66□□□□□ -0.22
NEDD4L-225ENST00000589054 NKX2-5P52952 324 aaPredicted RBP13.66□□□□□ -0.22
NEDD4L-225ENST00000589054 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
NEDD4L-225ENST00000589054 PKIAP61925 76 aa13.65□□□□□ -0.22
NEDD4L-225ENST00000589054 REG3AQ06141 175 aa13.65□□□□□ -0.22
NEDD4L-225ENST00000589054 MANBALQ9NQG1 85 aa13.65□□□□□ -0.22
NEDD4L-225ENST00000589054 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.64□□□□□ -0.23
NEDD4L-225ENST00000589054 LYZL1Q6UWQ5 148 aa13.63□□□□□ -0.23
NEDD4L-225ENST00000589054 RAB5CP51148 216 aa13.62□□□□□ -0.23
NEDD4L-225ENST00000589054 SERTAD4-AS1Q5TG53 156 aa13.61□□□□□ -0.23
NEDD4L-225ENST00000589054 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
NEDD4L-225ENST00000589054 A0A1B0GUV1 79 aa13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 NTF3P20783 257 aa13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 GNG4P50150 75 aa13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 RPS20P60866 119 aaKnown RBP13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 CACNG7P62955 275 aa13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 EIF5AP63241 154 aaKnown RBP13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
NEDD4L-225ENST00000589054 MT1HL1P0DM35 61 aa13.59□□□□□ -0.23
NEDD4L-225ENST00000589054 CNBPP62633 177 aaKnown RBP13.59□□□□□ -0.23
NEDD4L-225ENST00000589054 H7C1H1 209 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 P01737 135 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 CHTF8P0CG12 524 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 SULT1A2P50226 295 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 NUDT10Q8NFP7 164 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 NUDT11Q96G61 164 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 NIT2Q9NQR4 276 aa13.58□□□□□ -0.24
NEDD4L-225ENST00000589054 hDV102S1A0JD36 115 aa13.57□□□□□ -0.24
NEDD4L-225ENST00000589054 MEF2BQ02080 365 aaPredicted RBP13.57□□□□□ -0.24
NEDD4L-225ENST00000589054 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
NEDD4L-225ENST00000589054 MED9Q9NWA0 146 aa13.57□□□□□ -0.24
NEDD4L-225ENST00000589054 F2Z2F3 143 aa13.56□□□□□ -0.24
NEDD4L-225ENST00000589054 IFNA1P01562 189 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms