RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
CNN1-208ENST00000588935 TNFRSF18Q9Y5U5 241 aa10.07□□□□□ -0.8
CNN1-208ENST00000588935 IGLV2-18A0A075B6J9 118 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 TRBV7-3A0A075B6L6 115 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 A0A087WWC5 75 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 TRBV10-1A0A0K0K1A3 114 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 A0A1B0GW15 77 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 A0A1B0GXF2 115 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
CNN1-208ENST00000588935 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 IMMP2LQ96T52 175 aa10.06□□□□□ -0.8
CNN1-208ENST00000588935 NCR2O95944 276 aa10.05□□□□□ -0.8
CNN1-208ENST00000588935 S100A8P05109 93 aa10.05□□□□□ -0.8
CNN1-208ENST00000588935 SH2D6Q7Z4S9 175 aa10.05□□□□□ -0.8
CNN1-208ENST00000588935 NIT2Q9NQR4 276 aa10.05□□□□□ -0.8
CNN1-208ENST00000588935 M0R2N4 97 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 UBE2D3P61077 147 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 UBE2D2P62837 147 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
CNN1-208ENST00000588935 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
CNN1-208ENST00000588935 PLECQ15149 4684 aaKnown RBP10.04□□□□□ -0.8
CNN1-208ENST00000588935 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
CNN1-208ENST00000588935 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
CNN1-208ENST00000588935 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
CNN1-208ENST00000588935 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
CNN1-208ENST00000588935 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.81
CNN1-208ENST00000588935 Q9H8V8 135 aa10.02□□□□□ -0.81
CNN1-208ENST00000588935 TGIF2-C20orf24A0A0A6YYL0 155 aa10.01□□□□□ -0.81
CNN1-208ENST00000588935 CKS2P33552 79 aa10.01□□□□□ -0.81
CNN1-208ENST00000588935 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
CNN1-208ENST00000588935 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
CNN1-208ENST00000588935 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
CNN1-208ENST00000588935 TRAV8-6A0A0B4J262 113 aa10□□□□□ -0.81
CNN1-208ENST00000588935 LELP1Q5T871 98 aa10□□□□□ -0.81
CNN1-208ENST00000588935 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
CNN1-208ENST00000588935 D6R8Y8 96 aa9.99□□□□□ -0.81
CNN1-208ENST00000588935 TMEM136Q6ZRR5 245 aa9.99□□□□□ -0.81
CNN1-208ENST00000588935 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
CNN1-208ENST00000588935 SDHAF1A6NFY7 115 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 SIVA1O15304 175 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 PMCHP20382 165 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 TIRAPP58753 221 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 ELOBQ15370 118 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 KIAA1644Q3SXP7 199 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 DAZ4Q86SG3 579 aaKnown RBP9.98□□□□□ -0.81
CNN1-208ENST00000588935 CBLN2Q8IUK8 224 aa9.98□□□□□ -0.81
CNN1-208ENST00000588935 DAZ3Q9NR90 486 aaKnown RBP9.98□□□□□ -0.81
CNN1-208ENST00000588935 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 IGHV3-30P01768 117 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 IGHV3-30-5P0DP03 117 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 NRACQ8N912 160 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 FRZBQ92765 325 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
CNN1-208ENST00000588935 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 TMEM262E9PQX1 116 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 NPYP01303 97 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 APCSP02743 223 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
CNN1-208ENST00000588935 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 COTL1Q14019 142 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 Q8N3U1 123 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 CHCHD5Q9BSY4 110 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 TMEM70Q9BUB7 260 aa9.95□□□□□ -0.82
CNN1-208ENST00000588935 NBDYA0A0U1RRE5 68 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 I3L3M4 83 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 SCO1O75880 301 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 PPP1R17O96001 155 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 PPBPP02775 128 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CNN1-208ENST00000588935 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 GAGE6Q13070 117 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 GNB1LQ9BYB4 327 aa9.94□□□□□ -0.82
CNN1-208ENST00000588935 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 IGHV1-24A0A0C4DH33 117 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 VCYO14598 125 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 HLA-DQA1P01909 254 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 AMTP48728 403 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
CNN1-208ENST00000588935 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
CNN1-208ENST00000588935 TRAPPC1Q9Y5R8 145 aa9.93□□□□□ -0.82
CNN1-208ENST00000588935 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
CNN1-208ENST00000588935 COX19Q49B96 90 aa9.92□□□□□ -0.82
CNN1-208ENST00000588935 TMEM243Q9BU79 118 aa9.92□□□□□ -0.82
CNN1-208ENST00000588935 DNAH1Q9P2D7 4330 aa9.92□□□□□ -0.82
CNN1-208ENST00000588935 TSHBP01222 138 aa9.91□□□□□ -0.82
CNN1-208ENST00000588935 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms