RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 GAGE12JA6NER3 117 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 M0QY20 66 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 CAMPP49913 170 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 GAGE1Q13065 139 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 GAGE4Q13068 117 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 GAGE5Q13069 117 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 GAGE13Q4V321 117 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 MRPL54Q6P161 138 aaKnown RBP13.55□□□□□ -0.24
CIRBP-220ENST00000588917 RASL11AQ6T310 242 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 LYPD5Q6UWN5 251 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 NACAE9PAV3 2078 aa13.55□□□□□ -0.24
CIRBP-220ENST00000588917 TIRAPP58753 221 aa13.54□□□□□ -0.24
CIRBP-220ENST00000588917 NIT2Q9NQR4 276 aa13.54□□□□□ -0.24
CIRBP-220ENST00000588917 TNFRSF18Q9Y5U5 241 aa13.54□□□□□ -0.24
CIRBP-220ENST00000588917 A0A1B0GXF2 115 aa13.53□□□□□ -0.24
CIRBP-220ENST00000588917 GTSF1LQ9H1H1 148 aa13.53□□□□□ -0.24
CIRBP-220ENST00000588917 RAB4AP20338 218 aa13.52□□□□□ -0.25
CIRBP-220ENST00000588917 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
CIRBP-220ENST00000588917 MRAP2Q96G30 205 aa13.52□□□□□ -0.25
CIRBP-220ENST00000588917 LINC00588Q9Y4M8 146 aa13.52□□□□□ -0.25
CIRBP-220ENST00000588917 PPP1R17O96001 155 aa13.51□□□□□ -0.25
CIRBP-220ENST00000588917 FAM104BQ5XKR9 115 aa13.51□□□□□ -0.25
CIRBP-220ENST00000588917 GATD1Q8NB37 220 aa13.51□□□□□ -0.25
CIRBP-220ENST00000588917 Q9UF83 564 aa13.51□□□□□ -0.25
CIRBP-220ENST00000588917 MRPS16Q9Y3D3 137 aaKnown RBP13.51□□□□□ -0.25
CIRBP-220ENST00000588917 LINC00694P0DN24 101 aa13.5□□□□□ -0.25
CIRBP-220ENST00000588917 UBE2D3P61077 147 aa13.5□□□□□ -0.25
CIRBP-220ENST00000588917 UBE2D2P62837 147 aa13.5□□□□□ -0.25
CIRBP-220ENST00000588917 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
CIRBP-220ENST00000588917 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
CIRBP-220ENST00000588917 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
CIRBP-220ENST00000588917 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
CIRBP-220ENST00000588917 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
CIRBP-220ENST00000588917 RNF185Q96GF1 192 aa13.49□□□□□ -0.25
CIRBP-220ENST00000588917 TRAV8-6A0A0B4J262 113 aa13.48□□□□□ -0.25
CIRBP-220ENST00000588917 COX19Q49B96 90 aa13.48□□□□□ -0.25
CIRBP-220ENST00000588917 TRAV26-2A0A0B4J265 109 aa13.47□□□□□ -0.25
CIRBP-220ENST00000588917 LELP1Q5T871 98 aa13.47□□□□□ -0.25
CIRBP-220ENST00000588917 URGCP-MRPS24S4R325 110 aa13.47□□□□□ -0.25
CIRBP-220ENST00000588917 ALMS1Q8TCU4 4167 aa13.46□□□□□ -0.25
CIRBP-220ENST00000588917 PPBPP02775 128 aa13.46□□□□□ -0.25
CIRBP-220ENST00000588917 CKS2P33552 79 aa13.46□□□□□ -0.25
CIRBP-220ENST00000588917 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.25
CIRBP-220ENST00000588917 Q9H8V8 135 aa13.46□□□□□ -0.25
CIRBP-220ENST00000588917 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
CIRBP-220ENST00000588917 OR10J3Q5JRS4 329 aa13.45□□□□□ -0.26
CIRBP-220ENST00000588917 SIVA1O15304 175 aa13.44□□□□□ -0.26
CIRBP-220ENST00000588917 ST20Q9HBF5 79 aa13.44□□□□□ -0.26
CIRBP-220ENST00000588917 K7EP13 123 aa13.42□□□□□ -0.26
CIRBP-220ENST00000588917 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
CIRBP-220ENST00000588917 GNB1LQ9BYB4 327 aa13.42□□□□□ -0.26
CIRBP-220ENST00000588917 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
CIRBP-220ENST00000588917 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
CIRBP-220ENST00000588917 ORMDL3Q8N138 153 aa13.41□□□□□ -0.26
CIRBP-220ENST00000588917 SMCO4Q9NRQ5 59 aa13.41□□□□□ -0.26
CIRBP-220ENST00000588917 VPS13DQ5THJ4 4388 aa13.41□□□□□ -0.26
CIRBP-220ENST00000588917 TRBV24-1A0A075B6N3 115 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 IGHV3-38A0A0C4DH36 116 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 SDHAF1A6NFY7 115 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 PHOX2AO14813 284 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 HLA-DQA1P01909 254 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 ELOBQ15370 118 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 TMEM136Q6ZRR5 245 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 C20orf78Q9BR46 151 aa13.4□□□□□ -0.26
CIRBP-220ENST00000588917 D6R8Y8 96 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 I3L3M4 83 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 VCYO14598 125 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 MT-ND6P03923 174 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 PMCHP20382 165 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 PKIAP61925 76 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 COTL1Q14019 142 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 TTC32Q5I0X7 151 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 LAMTOR2Q9Y2Q5 125 aa13.39□□□□□ -0.27
CIRBP-220ENST00000588917 TRBV25-1A0A075B6N4 114 aa13.38□□□□□ -0.27
CIRBP-220ENST00000588917 SMKR1H3BMG3 65 aa13.38□□□□□ -0.27
CIRBP-220ENST00000588917 NCR2O95944 276 aa13.38□□□□□ -0.27
CIRBP-220ENST00000588917 RPS10P46783 165 aaKnown RBP13.38□□□□□ -0.27
CIRBP-220ENST00000588917 POLR2KP53803 58 aaKnown RBP13.38□□□□□ -0.27
CIRBP-220ENST00000588917 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
CIRBP-220ENST00000588917 NRACQ8N912 160 aa13.38□□□□□ -0.27
CIRBP-220ENST00000588917 IGHV1-24A0A0C4DH33 117 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 NBDYA0A0U1RRE5 68 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 GAS8-AS1O95177 125 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 APCSP02743 223 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 DNAH10OSP0CZ25 163 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 WFDC10BQ8IUB3 73 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 TMEM70Q9BUB7 260 aa13.37□□□□□ -0.27
CIRBP-220ENST00000588917 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
CIRBP-220ENST00000588917 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
CIRBP-220ENST00000588917 IQCJQ1A5X6 159 aa13.36□□□□□ -0.27
CIRBP-220ENST00000588917 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
CIRBP-220ENST00000588917 TGIF2-C20orf24A0A0A6YYL0 155 aa13.35□□□□□ -0.27
CIRBP-220ENST00000588917 TCAPO15273 167 aa13.35□□□□□ -0.27
CIRBP-220ENST00000588917 RPL32P62910 135 aaKnown RBP13.35□□□□□ -0.27
CIRBP-220ENST00000588917 LINC01556Q5JQF7 62 aa13.35□□□□□ -0.27
CIRBP-220ENST00000588917 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms