RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 TP53TG1Q9Y2A0 90 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 FN1P02751 2386 aaKnown RBP5.51□□□□□ -1.53
ZNF554-202ENST00000588534 ATP6V0E2Q8NHE4 81 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 PHLDA1Q8WV24 401 aaPredicted RBP5.51□□□□□ -1.53
ZNF554-202ENST00000588534 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 CNFNQ9BYD5 112 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 M0QXV9 152 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 APOMO95445 188 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 C11orf45Q8TAV5 145 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 LAMA1P25391 3075 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 EYSQ5T1H1 3165 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 K7EP13 123 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 IGKCP01834 107 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 MALP21145 153 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 NMUP48645 174 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 SRSF9Q13242 221 aaKnown RBP eCLIP5.51□□□□□ -1.53
ZNF554-202ENST00000588534 JOSD1Q15040 202 aaPredicted RBP5.51□□□□□ -1.53
ZNF554-202ENST00000588534 C9orf85Q96MD7 179 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 TP53TG3Q9ULZ0 132 aa5.51□□□□□ -1.53
ZNF554-202ENST00000588534 CFAP46Q8IYW2 2715 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 IGKV3OR2-268A0A0C4DH90 116 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 DDTP30046 118 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 CCL18P55774 89 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 BATFQ16520 125 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 LYRM7Q5U5X0 104 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 PLEKHB2Q96CS7 222 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 RS1O15537 224 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 NEGR1Q7Z3B1 354 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 MSRB1Q9NZV6 116 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 PAM16Q9Y3D7 125 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 TRBV6-4A0A1B0GX49 114 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 GYPEP15421 78 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 SPATA45Q537H7 98 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 RASL10AQ92737 203 aa5.5□□□□□ -1.53
ZNF554-202ENST00000588534 TRAV26-2A0A0B4J265 109 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 PMVKQ15126 192 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 FAM222AQ5U5X8 452 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 TET2Q6N021 2002 aaPredicted RBP5.49□□□□□ -1.53
ZNF554-202ENST00000588534 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 RPL32P62910 135 aaKnown RBP5.49□□□□□ -1.53
ZNF554-202ENST00000588534 CHD6Q8TD26 2715 aa5.49□□□□□ -1.53
ZNF554-202ENST00000588534 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
ZNF554-202ENST00000588534 A6NDN8 102 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 H7C423 109 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 RNASE3P12724 160 aaKnown RBP5.48□□□□□ -1.53
ZNF554-202ENST00000588534 MEIG1Q5JSS6 88 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 AMTNQ6UX39 209 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 Q6ZTI0 123 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 GATD1Q8NB37 220 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 RNF183Q96D59 192 aa5.48□□□□□ -1.53
ZNF554-202ENST00000588534 SORL1Q92673 2214 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 TRAV10A0A0B4J240 114 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 IGHV4-28A0A0C4DH34 117 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 ZNF25P17030 456 aaPredicted RBP5.47□□□□□ -1.53
ZNF554-202ENST00000588534 PRR9Q5T870 116 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 LGALS9CQ6DKI2 356 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 C2CD3Q4AC94 2353 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 AKAP9Q99996 3911 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 CFAP126Q5VTH2 177 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 C15orf53Q8NAA6 179 aa5.47□□□□□ -1.53
ZNF554-202ENST00000588534 C3orf79P0CE67 100 aa5.46□□□□□ -1.53
ZNF554-202ENST00000588534 SPATA3Q8NHX4 192 aa5.46□□□□□ -1.53
ZNF554-202ENST00000588534 SCRT2Q9NQ03 307 aa5.46□□□□□ -1.53
ZNF554-202ENST00000588534 A0A0J9YY99 117 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 A0A1B0GV72 72 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 FRMD6-AS1P0C7T7 363 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 HERVK_113P63121 156 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 FAM19A4Q96LR4 140 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 C11orf21Q9P2W6 132 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 ITPR3Q14573 2671 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 WFDC10AQ9H1F0 79 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 PKIGQ9Y2B9 76 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 U3KQK5 164 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 UNC79Q9P2D8 2635 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 SMG1Q96Q15 3661 aaKnown RBP5.46□□□□□ -1.54
ZNF554-202ENST00000588534 ZFHX4Q86UP3 3567 aa5.46□□□□□ -1.54
ZNF554-202ENST00000588534 CCL25O15444 150 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 CRYBA4P53673 196 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 GAGE6Q13070 117 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 C1orf158Q8N1D5 194 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 RPL39LQ96EH5 51 aaKnown RBP5.45□□□□□ -1.54
ZNF554-202ENST00000588534 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
ZNF554-202ENST00000588534 VPS13AQ96RL7 3174 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 FREM2Q5SZK8 3169 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 FLNAP21333 2647 aaKnown RBP5.45□□□□□ -1.54
ZNF554-202ENST00000588534 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 F8VRH5 84 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 OVOL2Q9BRP0 275 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 DEFB131BA0A096LNP1 70 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 NXPH4O95158 308 aa5.45□□□□□ -1.54
ZNF554-202ENST00000588534 NPSP0C0P6 89 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms