RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 VCYO14598 125 aa14.27□□□□□ -0.13
TRIM47-204ENST00000587339 TEX43Q6ZNM6 134 aa14.27□□□□□ -0.13
TRIM47-204ENST00000587339 NEGR1Q7Z3B1 354 aa14.27□□□□□ -0.13
TRIM47-204ENST00000587339 NUDT3O95989 172 aa14.26□□□□□ -0.13
TRIM47-204ENST00000587339 PET117Q6UWS5 81 aa14.26□□□□□ -0.13
TRIM47-204ENST00000587339 ZFP2Q6ZN57 461 aa14.26□□□□□ -0.13
TRIM47-204ENST00000587339 OR4C5Q8NGB2 326 aa14.26□□□□□ -0.13
TRIM47-204ENST00000587339 KIR2DL4Q99706 377 aa14.26□□□□□ -0.13
TRIM47-204ENST00000587339 SPATA12Q7Z6I5 190 aa14.25□□□□□ -0.13
TRIM47-204ENST00000587339 TRBV27A0A0K0K1C4 114 aa14.25□□□□□ -0.13
TRIM47-204ENST00000587339 C20orf202A1L168 122 aa14.25□□□□□ -0.13
TRIM47-204ENST00000587339 IFI27L1Q96BM0 104 aa14.25□□□□□ -0.13
TRIM47-204ENST00000587339 C18orf15Q96N68 181 aa14.25□□□□□ -0.13
TRIM47-204ENST00000587339 IGHV4-30-4P0DP06 118 aa14.24□□□□□ -0.13
TRIM47-204ENST00000587339 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
TRIM47-204ENST00000587339 OVOL2Q9BRP0 275 aa14.24□□□□□ -0.13
TRIM47-204ENST00000587339 COL6A5A8TX70 2615 aa14.24□□□□□ -0.13
TRIM47-204ENST00000587339 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 Q6ZSN1 163 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 VAMP8Q9BV40 100 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 P0DMU3 169 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 FAM231AP0DMU4 169 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 FAM231CP0DMU5 169 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 DEFA6Q01524 100 aa14.23□□□□□ -0.13
TRIM47-204ENST00000587339 NACAE9PAV3 2078 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 TRAV4A0A0B4J268 109 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 KRTAP10-11P60412 298 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 EGFEM1PQ0D2K5 195 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 DEFB135Q30KP9 77 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 ATOH7Q8N100 152 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 ZNF479Q96JC4 524 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 X6R8D5 127 aa14.22□□□□□ -0.13
TRIM47-204ENST00000587339 TSTD3H0UI37 97 aa14.21□□□□□ -0.13
TRIM47-204ENST00000587339 EMP1P54849 157 aa14.21□□□□□ -0.13
TRIM47-204ENST00000587339 PKIAP61925 76 aa14.21□□□□□ -0.13
TRIM47-204ENST00000587339 TRGV2A0A075B6R0 118 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 GAGE12BA1L429 117 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 GAGE7O76087 117 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 GAGE12FP0CL80 117 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 GAGE12GP0CL81 117 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 GAGE12IP0CL82 117 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 DEFB104AQ8WTQ1 72 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 PRO1933Q9H354 126 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 PAM16Q9Y3D7 125 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 TNFRSF18Q9Y5U5 241 aa14.21□□□□□ -0.14
TRIM47-204ENST00000587339 ATP5LO75964 103 aa14.2□□□□□ -0.14
TRIM47-204ENST00000587339 LINC01545Q5VT33 79 aa14.2□□□□□ -0.14
TRIM47-204ENST00000587339 G0S2P27469 103 aa14.19□□□□□ -0.14
TRIM47-204ENST00000587339 C2orf66Q6UXQ4 117 aa14.19□□□□□ -0.14
TRIM47-204ENST00000587339 TOMM6Q96B49 74 aa14.19□□□□□ -0.14
TRIM47-204ENST00000587339 I3L3M4 83 aa14.19□□□□□ -0.14
TRIM47-204ENST00000587339 Q9UF83 564 aa14.19□□□□□ -0.14
TRIM47-204ENST00000587339 PMCHL2Q9BQD1 86 aa14.18□□□□□ -0.14
TRIM47-204ENST00000587339 NEXN-AS1Q8NBZ9 246 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 DNAJC30Q96LL9 226 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 PRSS1P07477 247 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 SCGB3A1Q96QR1 104 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 CYSLTR1Q9Y271 337 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 PKD1L1Q8TDX9 2849 aa14.17□□□□□ -0.14
TRIM47-204ENST00000587339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.16□□□□□ -0.14
TRIM47-204ENST00000587339 LGALS9CQ6DKI2 356 aa14.16□□□□□ -0.14
TRIM47-204ENST00000587339 OR11H2Q8NH07 326 aa14.16□□□□□ -0.14
TRIM47-204ENST00000587339 CIDEAO60543 219 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 TSHBP01222 138 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 TRAV9-2A0A087WT02 112 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 LINC01549A6NIU2 74 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 G3V4G9 280 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 RHOHQ15669 191 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 MAJINQ3KP22 176 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 SPATA45Q537H7 98 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 C14orf144Q96I85 54 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 TP53TG1Q9Y2A0 90 aa14.15□□□□□ -0.14
TRIM47-204ENST00000587339 K7EQD1 137 aa14.14□□□□□ -0.15
TRIM47-204ENST00000587339 RIPPLY3P57055 190 aa14.14□□□□□ -0.15
TRIM47-204ENST00000587339 DEFB130BP0DP73 79 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 DEFB130AP0DP74 79 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 Q6ZN92 141 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 ERASQ7Z444 233 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 TRBV10-1A0A0K0K1A3 114 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 RNF183Q96D59 192 aa14.13□□□□□ -0.15
TRIM47-204ENST00000587339 A8MZ25 164 aa14.12□□□□□ -0.15
TRIM47-204ENST00000587339 RPL39P62891 51 aaKnown RBP14.12□□□□□ -0.15
TRIM47-204ENST00000587339 TRBV7-3A0A075B6L6 115 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 LINC00612Q8N6U2 182 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 ZNRF2Q8NHG8 242 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 TRGV4A0A0C4DH28 118 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 MIFP14174 115 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 DDTP30046 118 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 RPL36AP83881 106 aaKnown RBP14.11□□□□□ -0.15
TRIM47-204ENST00000587339 ODF1Q14990 250 aa14.11□□□□□ -0.15
TRIM47-204ENST00000587339 RPL36ALQ969Q0 106 aaKnown RBP14.11□□□□□ -0.15
TRIM47-204ENST00000587339 IGHV4-28A0A0C4DH34 117 aa14.1□□□□□ -0.15
TRIM47-204ENST00000587339 HSBP1L1C9JCN9 74 aa14.1□□□□□ -0.15
TRIM47-204ENST00000587339 DKK2Q9UBU2 259 aa14.1□□□□□ -0.15
TRIM47-204ENST00000587339 TRBV6-4A0A1B0GX49 114 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 hDV102S1A0JD36 115 aa14.09□□□□□ -0.15
TRIM47-204ENST00000587339 LYRM9A8MSI8 78 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 707.3 ms