RNA–Protein interactions for RNA: ENST00000586365.5

CXXC1-204, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-204ENST00000586365 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
CXXC1-204ENST00000586365 PHLDA3Q9Y5J5 127 aa12.66□□□□□ -0.38
CXXC1-204ENST00000586365 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
CXXC1-204ENST00000586365 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
CXXC1-204ENST00000586365 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
CXXC1-204ENST00000586365 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
CXXC1-204ENST00000586365 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
CXXC1-204ENST00000586365 PANO1I0J062 215 aa12.64□□□□□ -0.39
CXXC1-204ENST00000586365 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
CXXC1-204ENST00000586365 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
CXXC1-204ENST00000586365 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
CXXC1-204ENST00000586365 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
CXXC1-204ENST00000586365 UBE2D3P61077 147 aa12.63□□□□□ -0.39
CXXC1-204ENST00000586365 UBE2D2P62837 147 aa12.63□□□□□ -0.39
CXXC1-204ENST00000586365 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
CXXC1-204ENST00000586365 CCL20P78556 96 aa12.63□□□□□ -0.39
CXXC1-204ENST00000586365 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 ANGP03950 147 aaKnown RBP12.62□□□□□ -0.39
CXXC1-204ENST00000586365 S100A9P06702 114 aaKnown RBP12.62□□□□□ -0.39
CXXC1-204ENST00000586365 MIAQ16674 131 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
CXXC1-204ENST00000586365 CXCL1P09341 107 aa12.61□□□□□ -0.39
CXXC1-204ENST00000586365 MPV17L2Q567V2 206 aa12.61□□□□□ -0.39
CXXC1-204ENST00000586365 PRR27Q6MZM9 219 aa12.61□□□□□ -0.39
CXXC1-204ENST00000586365 GNG13Q9P2W3 67 aa12.61□□□□□ -0.39
CXXC1-204ENST00000586365 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
CXXC1-204ENST00000586365 C11orf52Q96A22 123 aa12.6□□□□□ -0.39
CXXC1-204ENST00000586365 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
CXXC1-204ENST00000586365 SNAI2O43623 268 aa12.59□□□□□ -0.39
CXXC1-204ENST00000586365 RPL35P42766 123 aaKnown RBP12.59□□□□□ -0.39
CXXC1-204ENST00000586365 PKIAP61925 76 aa12.59□□□□□ -0.39
CXXC1-204ENST00000586365 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
CXXC1-204ENST00000586365 DPH3Q96FX2 82 aa12.59□□□□□ -0.39
CXXC1-204ENST00000586365 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
CXXC1-204ENST00000586365 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
CXXC1-204ENST00000586365 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
CXXC1-204ENST00000586365 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
CXXC1-204ENST00000586365 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
CXXC1-204ENST00000586365 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
CXXC1-204ENST00000586365 SULT1A2P50226 295 aa12.56□□□□□ -0.4
CXXC1-204ENST00000586365 ZNF56Q15929 161 aa12.56□□□□□ -0.4
CXXC1-204ENST00000586365 CENPWQ5EE01 88 aa12.56□□□□□ -0.4
CXXC1-204ENST00000586365 CHCHD5Q9BSY4 110 aa12.56□□□□□ -0.4
CXXC1-204ENST00000586365 SSBP4Q9BWG4 385 aaPredicted RBP12.56□□□□□ -0.4
CXXC1-204ENST00000586365 OR5AL1P0C617 328 aa12.55□□□□□ -0.4
CXXC1-204ENST00000586365 RAB5CP51148 216 aa12.55□□□□□ -0.4
CXXC1-204ENST00000586365 CNBPP62633 177 aaKnown RBP12.55□□□□□ -0.4
CXXC1-204ENST00000586365 KRTAP26-1Q6PEX3 210 aa12.55□□□□□ -0.4
CXXC1-204ENST00000586365 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
CXXC1-204ENST00000586365 PRR34Q9NV39 138 aa12.55□□□□□ -0.4
CXXC1-204ENST00000586365 A0A087WYN8 130 aa12.54□□□□□ -0.4
CXXC1-204ENST00000586365 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
CXXC1-204ENST00000586365 LINC01600Q96MT4 127 aa12.54□□□□□ -0.4
CXXC1-204ENST00000586365 IGHV3-64A0A075B6Q5 118 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 GZMBP10144 247 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 RAB4BP61018 213 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 SSTP61278 116 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 Q6ZNX1 250 aa12.53□□□□□ -0.4
CXXC1-204ENST00000586365 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
CXXC1-204ENST00000586365 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.41
CXXC1-204ENST00000586365 LINC00269Q8N2A0 174 aa12.52□□□□□ -0.41
CXXC1-204ENST00000586365 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
CXXC1-204ENST00000586365 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
CXXC1-204ENST00000586365 TMEM97Q5BJF2 176 aa12.51□□□□□ -0.41
CXXC1-204ENST00000586365 CLPSL2Q6UWE3 100 aa12.51□□□□□ -0.41
CXXC1-204ENST00000586365 KIF25-AS1Q9Y6Z4 181 aa12.51□□□□□ -0.41
CXXC1-204ENST00000586365 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
CXXC1-204ENST00000586365 hDV102S1A0JD36 115 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 C19orf71A6NCJ1 209 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 IGLC6P0CF74 106 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 BCL2P10415 239 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 RBX1P62877 108 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 C7orf33Q8WU49 177 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 AP5S1Q9NUS5 200 aa12.5□□□□□ -0.41
CXXC1-204ENST00000586365 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 PHOX2AO14813 284 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 CHTF8P0CG12 524 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 SPACA4Q8TDM5 124 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 PLAC8Q9NZF1 115 aa12.49□□□□□ -0.41
CXXC1-204ENST00000586365 IFNA1P01562 189 aa12.48□□□□□ -0.41
CXXC1-204ENST00000586365 GNG4P50150 75 aa12.48□□□□□ -0.41
CXXC1-204ENST00000586365 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
CXXC1-204ENST00000586365 TPPP3Q9BW30 176 aa12.48□□□□□ -0.41
CXXC1-204ENST00000586365 F5H697 171 aa12.47□□□□□ -0.41
CXXC1-204ENST00000586365 PDE6DO43924 150 aa12.47□□□□□ -0.41
CXXC1-204ENST00000586365 GAGE6Q13070 117 aa12.47□□□□□ -0.41
CXXC1-204ENST00000586365 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
CXXC1-204ENST00000586365 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
CXXC1-204ENST00000586365 hCG_2014768A0A024R1R8 64 aa12.46□□□□□ -0.41
CXXC1-204ENST00000586365 ODF1Q14990 250 aa12.46□□□□□ -0.41
CXXC1-204ENST00000586365 SMIM12Q96EX1 92 aa12.46□□□□□ -0.41
CXXC1-204ENST00000586365 MED9Q9NWA0 146 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms