RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 SMCO4Q9NRQ5 59 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 TNFRSF18Q9Y5U5 241 aa6.48□□□□□ -1.37
UBBP4-201ENST00000583708 TCAPO15273 167 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 MGPP08493 103 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 LINC00694P0DN24 101 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 RAB4AP20338 218 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 S100A1P23297 94 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 CAMPP49913 170 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 PKIAP61925 76 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 UPK3BQ9BT76 320 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 GTSF1LQ9H1H1 148 aa6.47□□□□□ -1.37
UBBP4-201ENST00000583708 HLA-DQA1P01909 254 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 BTF3P20290 206 aaKnown RBP6.46□□□□□ -1.38
UBBP4-201ENST00000583708 UBE2D3P61077 147 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 UBE2D2P62837 147 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
UBBP4-201ENST00000583708 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.38
UBBP4-201ENST00000583708 LYPD5Q6UWN5 251 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 NEXN-AS1Q8NBZ9 246 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 ZNRF2Q8NHG8 242 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 C20orf78Q9BR46 151 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 MRPS16Q9Y3D3 137 aaKnown RBP6.46□□□□□ -1.38
UBBP4-201ENST00000583708 NACAE9PAV3 2078 aa6.46□□□□□ -1.38
UBBP4-201ENST00000583708 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
UBBP4-201ENST00000583708 NCR2O95944 276 aa6.45□□□□□ -1.38
UBBP4-201ENST00000583708 CKS2P33552 79 aa6.45□□□□□ -1.38
UBBP4-201ENST00000583708 LELP1Q5T871 98 aa6.45□□□□□ -1.38
UBBP4-201ENST00000583708 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
UBBP4-201ENST00000583708 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 VCYO14598 125 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 GAGE1Q13065 139 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 GAGE4Q13068 117 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 GAGE5Q13069 117 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 ELOBQ15370 118 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 ESRGQ1W209 222 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
UBBP4-201ENST00000583708 GAGE13Q4V321 117 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 UBE2DNLQ8IWF7 75 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 AMN1Q8IY45 258 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 ORMDL3Q8N138 153 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
UBBP4-201ENST00000583708 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
UBBP4-201ENST00000583708 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 LCE6AA0A183 80 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 PRSS47A8MTI9 375 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 OR10J3Q5JRS4 329 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 TMEM136Q6ZRR5 245 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 URGCP-MRPS24S4R325 110 aa6.43□□□□□ -1.38
UBBP4-201ENST00000583708 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 SDHAF1A6NFY7 115 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 H7C423 109 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 I3L3M4 83 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 K7EMI3 77 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 APCSP02743 223 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
UBBP4-201ENST00000583708 SMAGPQ0VAQ4 97 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 COTL1Q14019 142 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 TTC32Q5I0X7 151 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
UBBP4-201ENST00000583708 DNAH1Q9P2D7 4330 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 PMCHP20382 165 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 G0S2P27469 103 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 SUMO2P61956 95 aaKnown RBP6.41□□□□□ -1.38
UBBP4-201ENST00000583708 IQCJQ1A5X6 159 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 NRACQ8N912 160 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 YPEL4Q96NS1 127 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 KIR2DL4Q99706 377 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 Q9H8V8 135 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
UBBP4-201ENST00000583708 TRBV25-1A0A075B6N4 114 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 IGHV1-24A0A0C4DH33 117 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 LINC01549A6NIU2 74 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 D6R8Y8 96 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 SIVA1O15304 175 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 LY6G6CO95867 125 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 DNAH10OSP0CZ25 163 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 ATRAIDQ6UW56 229 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 Q9UF83 564 aa6.4□□□□□ -1.38
UBBP4-201ENST00000583708 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 TRAV26-2A0A0B4J265 109 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 IGHV3-38A0A0C4DH36 116 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 FABP9Q0Z7S8 132 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 LINC01556Q5JQF7 62 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
UBBP4-201ENST00000583708 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
UBBP4-201ENST00000583708 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
UBBP4-201ENST00000583708 A0A1B0GUV1 79 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms