RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 C15orf54Q8N8G6 183 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 GFRA4Q9GZZ7 299 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 V9GYV3 84 aa16.9■□□□□ 0.3
TSEN54-209ENST00000583454 FAM231BA6NCW3 169 aa16.89■□□□□ 0.29
TSEN54-209ENST00000583454 ADIRFQ15847 76 aa16.89■□□□□ 0.29
TSEN54-209ENST00000583454 TRBV7-3A0A075B6L6 115 aa16.88■□□□□ 0.29
TSEN54-209ENST00000583454 DNAH10OSP0CZ25 163 aa16.88■□□□□ 0.29
TSEN54-209ENST00000583454 RPL36AP83881 106 aaKnown RBP16.88■□□□□ 0.29
TSEN54-209ENST00000583454 TWIST1Q15672 202 aa16.88■□□□□ 0.29
TSEN54-209ENST00000583454 RPL36ALQ969Q0 106 aaKnown RBP16.88■□□□□ 0.29
TSEN54-209ENST00000583454 UBE2D3P61077 147 aa16.87■□□□□ 0.29
TSEN54-209ENST00000583454 UBE2D2P62837 147 aa16.87■□□□□ 0.29
TSEN54-209ENST00000583454 NEXN-AS1Q8NBZ9 246 aa16.87■□□□□ 0.29
TSEN54-209ENST00000583454 PGLYRP4Q96LB8 373 aa16.87■□□□□ 0.29
TSEN54-209ENST00000583454 DPH3P1Q9H4G8 78 aa16.87■□□□□ 0.29
TSEN54-209ENST00000583454 TRAV8-6A0A0B4J262 113 aa16.86■□□□□ 0.29
TSEN54-209ENST00000583454 BTF3P20290 206 aaKnown RBP16.86■□□□□ 0.29
TSEN54-209ENST00000583454 HIGD1CA8MV81 97 aa16.85■□□□□ 0.29
TSEN54-209ENST00000583454 K7EP13 123 aa16.85■□□□□ 0.29
TSEN54-209ENST00000583454 M0QY20 66 aa16.85■□□□□ 0.29
TSEN54-209ENST00000583454 OR10J3Q5JRS4 329 aa16.85■□□□□ 0.29
TSEN54-209ENST00000583454 A0A087WWC5 75 aa16.84■□□□□ 0.29
TSEN54-209ENST00000583454 MGPP08493 103 aa16.84■□□□□ 0.29
TSEN54-209ENST00000583454 SUMO4Q6EEV6 95 aa16.84■□□□□ 0.29
TSEN54-209ENST00000583454 TRAV9-2A0A087WT02 112 aa16.83■□□□□ 0.28
TSEN54-209ENST00000583454 IGHV3-38A0A0C4DH36 116 aa16.83■□□□□ 0.28
TSEN54-209ENST00000583454 H7C1H1 209 aa16.82■□□□□ 0.28
TSEN54-209ENST00000583454 LINC01556Q5JQF7 62 aa16.82■□□□□ 0.28
TSEN54-209ENST00000583454 SPATA12Q7Z6I5 190 aa16.82■□□□□ 0.28
TSEN54-209ENST00000583454 A0A1B0GUT8 65 aa16.81■□□□□ 0.28
TSEN54-209ENST00000583454 KRTAP10-2P60368 255 aa16.81■□□□□ 0.28
TSEN54-209ENST00000583454 NUP35Q8NFH5 326 aa16.8■□□□□ 0.28
TSEN54-209ENST00000583454 BORCS7Q96B45 105 aa16.8■□□□□ 0.28
TSEN54-209ENST00000583454 DNAJC30Q96LL9 226 aa16.8■□□□□ 0.28
TSEN54-209ENST00000583454 RASL11AQ6T310 242 aa16.79■□□□□ 0.28
TSEN54-209ENST00000583454 SMIM15Q7Z3B0 74 aa16.79■□□□□ 0.28
TSEN54-209ENST00000583454 MAPKAPK5-AS1Q8N8E1 139 aa16.79■□□□□ 0.28
TSEN54-209ENST00000583454 SMIM27A0A1W2PRY6 76 aa16.78■□□□□ 0.28
TSEN54-209ENST00000583454 UQCC3Q6UW78 93 aa16.78■□□□□ 0.28
TSEN54-209ENST00000583454 Q6ZRN7 208 aaPredicted RBP16.78■□□□□ 0.28
TSEN54-209ENST00000583454 NAT8BQ9UHF3 227 aa16.78■□□□□ 0.28
TSEN54-209ENST00000583454 DAZ4Q86SG3 579 aaKnown RBP16.77■□□□□ 0.28
TSEN54-209ENST00000583454 C10orf126Q8N4M7 172 aa16.77■□□□□ 0.28
TSEN54-209ENST00000583454 DAZ3Q9NR90 486 aaKnown RBP16.77■□□□□ 0.28
TSEN54-209ENST00000583454 NIT2Q9NQR4 276 aa16.76■□□□□ 0.27
TSEN54-209ENST00000583454 TNFRSF18Q9Y5U5 241 aa16.76■□□□□ 0.27
TSEN54-209ENST00000583454 PNRC1Q12796 327 aaPredicted RBP16.75■□□□□ 0.27
TSEN54-209ENST00000583454 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.75■□□□□ 0.27
TSEN54-209ENST00000583454 GATD1Q8NB37 220 aa16.75■□□□□ 0.27
TSEN54-209ENST00000583454 TRBV6-8A0A0A6YYG3 113 aa16.74■□□□□ 0.27
TSEN54-209ENST00000583454 RIGQ13278 110 aa16.74■□□□□ 0.27
TSEN54-209ENST00000583454 FRZBQ92765 325 aa16.74■□□□□ 0.27
TSEN54-209ENST00000583454 TMEM191AQ9H0A3 160 aa16.74■□□□□ 0.27
TSEN54-209ENST00000583454 Q8N1X5 172 aa16.73■□□□□ 0.27
TSEN54-209ENST00000583454 TRAV26-2A0A0B4J265 109 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 IBA57-AS1B1ANH7 110 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 IGHV3-30P01768 117 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 IGHV3-33P01772 117 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 IGHV3-30-3P0DP02 117 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 IGHV3-30-5P0DP03 117 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 TMEM97Q5BJF2 176 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 NFE4Q86UQ8 179 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 NIT1Q86X76 327 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 Q8N3U1 123 aa16.72■□□□□ 0.27
TSEN54-209ENST00000583454 TMEM218A2RU14 115 aa16.71■□□□□ 0.27
TSEN54-209ENST00000583454 PPP1R2P9O14990 202 aa16.71■□□□□ 0.27
TSEN54-209ENST00000583454 LINC00862A6NCI5 91 aa16.7■□□□□ 0.26
TSEN54-209ENST00000583454 NTM-AS1Q6ZSK4 140 aa16.7■□□□□ 0.26
TSEN54-209ENST00000583454 FAT1Q14517 4588 aa16.7■□□□□ 0.26
TSEN54-209ENST00000583454 ADCYAP1P18509 176 aa16.69■□□□□ 0.26
TSEN54-209ENST00000583454 COMMD7Q86VX2 200 aa16.69■□□□□ 0.26
TSEN54-209ENST00000583454 RNF185Q96GF1 192 aa16.69■□□□□ 0.26
TSEN54-209ENST00000583454 RAB4AP20338 218 aa16.68■□□□□ 0.26
TSEN54-209ENST00000583454 CHCHD7Q9BUK0 85 aa16.68■□□□□ 0.26
TSEN54-209ENST00000583454 A0A1B0GW15 77 aa16.67■□□□□ 0.26
TSEN54-209ENST00000583454 MT-ND4LP03901 98 aa16.67■□□□□ 0.26
TSEN54-209ENST00000583454 LAGE3Q14657 143 aa16.67■□□□□ 0.26
TSEN54-209ENST00000583454 RPL39LQ96EH5 51 aaKnown RBP16.67■□□□□ 0.26
TSEN54-209ENST00000583454 ANAPC16Q96DE5 110 aa16.66■□□□□ 0.26
TSEN54-209ENST00000583454 HERC1Q15751 4861 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 F8W036 122 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 IQCJQ1A5X6 159 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 KCNIP4Q6PIL6 250 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 AMN1Q8IY45 258 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 URGCP-MRPS24S4R325 110 aa16.65■□□□□ 0.26
TSEN54-209ENST00000583454 VPS13BQ7Z7G8 4022 aa16.64■□□□□ 0.25
TSEN54-209ENST00000583454 TRBV6-5A0A0K0K1A5 114 aa16.64■□□□□ 0.25
TSEN54-209ENST00000583454 SEC11CQ9BY50 192 aa16.64■□□□□ 0.25
TSEN54-209ENST00000583454 TRBV25-1A0A075B6N4 114 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 A0A087WX48 190 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 A0A1B0GXF2 115 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 GAS8-AS1O95177 125 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 MRAP2Q96G30 205 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 CHCHD5Q9BSY4 110 aa16.63■□□□□ 0.25
TSEN54-209ENST00000583454 IGHV1-24A0A0C4DH33 117 aa16.62■□□□□ 0.25
TSEN54-209ENST00000583454 TMEM262E9PQX1 116 aa16.62■□□□□ 0.25
TSEN54-209ENST00000583454 FUSP35637 526 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSEN54-209ENST00000583454 CAMPP49913 170 aa16.62■□□□□ 0.25
TSEN54-209ENST00000583454 PKIAP61925 76 aa16.62■□□□□ 0.25
TSEN54-209ENST00000583454 FAM104BQ5XKR9 115 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms