RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 SPTAN1Q13813 2472 aaKnown RBP3.33□□□□□ -1.88
PTPRM-215ENST00000583289 CACNA1AO00555 2505 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 CHD8Q9HCK8 2581 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 A0A096LNT2 108 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 A8MWV9 139 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 I3L3M4 83 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 CCL25O15444 150 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 GNRH2O43555 120 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 MGPP08493 103 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
PTPRM-215ENST00000583289 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 HIST2H2BCQ6DN03 193 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 Q71RC1 249 aaPredicted RBP3.33□□□□□ -1.88
PTPRM-215ENST00000583289 C4orf3Q8WVX3 66 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 C9orf85Q96MD7 179 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 DUX3Q96PT4 197 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 SPXQ9BT56 116 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 MCRIP2Q9BUT9 160 aaKnown RBP3.33□□□□□ -1.88
PTPRM-215ENST00000583289 MRPL35Q9NZE8 188 aaKnown RBP3.33□□□□□ -1.88
PTPRM-215ENST00000583289 KIF25-AS1Q9Y6Z4 181 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 ZFHX4Q86UP3 3567 aa3.33□□□□□ -1.88
PTPRM-215ENST00000583289 PKD1L2Q7Z442 2459 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 LRBAP50851 2863 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 ADGRG4Q8IZF6 3080 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 TRAV12-3A0A0B4J271 114 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 MYMXA0A1B0GTQ4 84 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 A8MTW9 85 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 E9PLD3 99 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 J3QR89 54 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 CIDEAO60543 219 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF688P0C7X2 276 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 IGHV4-31P0DP07 118 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 GATA1P15976 413 aaPredicted RBP3.32□□□□□ -1.88
PTPRM-215ENST00000583289 RIPPLY3P57055 190 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 SYNJ2BPP57105 145 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 TCTEX1D4Q5JR98 221 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 PRR9Q5T870 116 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 CEND1Q8N111 149 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 DNAJC30Q96LL9 226 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 SPAG8Q99932 426 aaPredicted RBP3.32□□□□□ -1.88
PTPRM-215ENST00000583289 CHAC1Q9BUX1 264 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF702PQ9H963 129 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF256Q9Y2P7 627 aaPredicted RBP3.32□□□□□ -1.88
PTPRM-215ENST00000583289 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
PTPRM-215ENST00000583289 HRNRQ86YZ3 2850 aaPredicted RBP3.32□□□□□ -1.88
PTPRM-215ENST00000583289 IGKV3-7A0A075B6H7 116 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 TRAV26-2A0A0B4J265 109 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 SDHAF1A6NFY7 115 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 F6UB75 175 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 F8W1H4 67 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 K7EP34 96 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 M0QY20 66 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 M0R2P5 195 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 SRD5A1P18405 259 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 EDN2P20800 178 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 FXYD7P58549 80 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 LINC00315P59091 139 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF415Q09FC8 603 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 NSUN5P1Q3KNT7 163 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF876PQ49A33 203 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 GTSCR1Q86UQ5 136 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 PCP2Q8IVA1 136 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF843Q8N446 348 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 DYNLRB2Q8TF09 96 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 BAALCQ8WXS3 180 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 VCX2Q9H322 139 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 CFAP47Q6ZTR5 3102 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 KALRNO60229 2985 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 TACC2O95359 2948 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 SPG11Q96JI7 2443 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 ABCA2Q9BZC7 2435 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 CSPG4Q6UVK1 2322 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
PTPRM-215ENST00000583289 PRRC2AP48634 2157 aaKnown RBP3.31□□□□□ -1.88
PTPRM-215ENST00000583289 TRAV8-6A0A0B4J262 113 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 H3BMM0 161 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 H3BUT2 72 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 CRYGDP07320 174 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 PRB4P10163 310 aaPredicted RBP3.3□□□□□ -1.88
PTPRM-215ENST00000583289 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF56Q15929 161 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 SCGB1D4Q6XE38 83 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 NFE4Q86UQ8 179 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 PLEKHB2Q96CS7 222 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 TP73-AS1Q9UF72 201 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 TP53TG1Q9Y2A0 90 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 SPCS1Q9Y6A9 102 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms