RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SRSF3P84103 164 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 XP32Q5T750 250 aa8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 Q6ZRN7 208 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
SMARCE1-218ENST00000582955 PKD1P98161 4303 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 C9JQL5 133 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 H7C1H1 209 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 TMEM241Q24JQ0 296 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 FAM74A3Q4VXF1 159 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 SUMO4Q6EEV6 95 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 Q9HAA7 133 aa8.51□□□□□ -1.05
SMARCE1-218ENST00000582955 IBA57-AS1B1ANH7 110 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 ADIRFQ15847 76 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 CT83Q5H943 113 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 SMIM15Q7Z3B0 74 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 Q8N3U1 123 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 C15orf54Q8N8G6 183 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 BORCS7Q96B45 105 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 OSTCQ9NRP0 149 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 URGCP-MRPS24S4R325 110 aa8.5□□□□□ -1.05
SMARCE1-218ENST00000582955 M0QY20 66 aa8.49□□□□□ -1.05
SMARCE1-218ENST00000582955 RAB14P61106 215 aa8.49□□□□□ -1.05
SMARCE1-218ENST00000582955 SMDT1Q9H4I9 107 aa8.49□□□□□ -1.05
SMARCE1-218ENST00000582955 NAT8Q9UHE5 227 aa8.49□□□□□ -1.05
SMARCE1-218ENST00000582955 A0A087WX48 190 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 EREGO14944 169 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 PSCAO43653 123 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 RPL23P62829 140 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 NIT1Q86X76 327 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 ISOC2Q96AB3 205 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-218ENST00000582955 HIGD1CA8MV81 97 aa8.47□□□□□ -1.05
SMARCE1-218ENST00000582955 TMEM262E9PQX1 116 aa8.47□□□□□ -1.05
SMARCE1-218ENST00000582955 LAGE3Q14657 143 aa8.47□□□□□ -1.05
SMARCE1-218ENST00000582955 TMEM97Q5BJF2 176 aa8.47□□□□□ -1.05
SMARCE1-218ENST00000582955 DNAH11Q96DT5 4516 aa8.46□□□□□ -1.05
SMARCE1-218ENST00000582955 FOXA3P55318 350 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-218ENST00000582955 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
SMARCE1-218ENST00000582955 GFRA4Q9GZZ7 299 aa8.46□□□□□ -1.06
SMARCE1-218ENST00000582955 NIT2Q9NQR4 276 aa8.46□□□□□ -1.06
SMARCE1-218ENST00000582955 V9GYV3 84 aa8.46□□□□□ -1.06
SMARCE1-218ENST00000582955 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 A0A087WTM6 91 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 TRAV26-2A0A0B4J265 109 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 KLK12Q9UKR0 248 aa8.45□□□□□ -1.06
SMARCE1-218ENST00000582955 TRBV25-1A0A075B6N4 114 aa8.44□□□□□ -1.06
SMARCE1-218ENST00000582955 ELOBQ15370 118 aa8.44□□□□□ -1.06
SMARCE1-218ENST00000582955 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
SMARCE1-218ENST00000582955 GATD1Q8NB37 220 aa8.44□□□□□ -1.06
SMARCE1-218ENST00000582955 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
SMARCE1-218ENST00000582955 IGHV1-24A0A0C4DH33 117 aa8.43□□□□□ -1.06
SMARCE1-218ENST00000582955 PKIAP61925 76 aa8.43□□□□□ -1.06
SMARCE1-218ENST00000582955 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
SMARCE1-218ENST00000582955 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
SMARCE1-218ENST00000582955 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
SMARCE1-218ENST00000582955 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 GAGE6Q13070 117 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 RIGQ13278 110 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 FRZBQ92765 325 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 RMI2Q96E14 147 aa8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 RPL39LQ96EH5 51 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-218ENST00000582955 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 COTL1Q14019 142 aa8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 Q8N976 141 aa8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
SMARCE1-218ENST00000582955 IGKV2D-24A0A075B6R9 120 aa8.4□□□□□ -1.06
SMARCE1-218ENST00000582955 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
SMARCE1-218ENST00000582955 CRPP02741 224 aa8.4□□□□□ -1.06
SMARCE1-218ENST00000582955 ATRAIDQ6UW56 229 aa8.4□□□□□ -1.06
SMARCE1-218ENST00000582955 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
SMARCE1-218ENST00000582955 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
SMARCE1-218ENST00000582955 UBE2L6O14933 153 aa8.39□□□□□ -1.07
SMARCE1-218ENST00000582955 AMTP48728 403 aa8.39□□□□□ -1.07
SMARCE1-218ENST00000582955 RBX1P62877 108 aa8.39□□□□□ -1.07
SMARCE1-218ENST00000582955 IFITM2Q01629 132 aa8.39□□□□□ -1.07
SMARCE1-218ENST00000582955 Q0VG73 95 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms