RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
TOP3A-213ENST00000582230 SVBPQ8N300 66 aa13.8□□□□□ -0.2
TOP3A-213ENST00000582230 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.8□□□□□ -0.2
TOP3A-213ENST00000582230 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 SNAPINO95295 136 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 CAMPP49913 170 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 UBE2D3P61077 147 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 UBE2D2P62837 147 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
TOP3A-213ENST00000582230 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 BTF3L4Q96K17 158 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 NIT2Q9NQR4 276 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 TNFRSF18Q9Y5U5 241 aa13.79□□□□□ -0.2
TOP3A-213ENST00000582230 PLECQ15149 4684 aaKnown RBP13.78□□□□□ -0.2
TOP3A-213ENST00000582230 GATD1Q8NB37 220 aa13.78□□□□□ -0.2
TOP3A-213ENST00000582230 RPS10P5Q9NQ39 176 aa13.78□□□□□ -0.2
TOP3A-213ENST00000582230 RAB4AP20338 218 aa13.77□□□□□ -0.21
TOP3A-213ENST00000582230 AMN1Q8IY45 258 aa13.77□□□□□ -0.21
TOP3A-213ENST00000582230 MRAP2Q96G30 205 aa13.77□□□□□ -0.21
TOP3A-213ENST00000582230 RNF185Q96GF1 192 aa13.77□□□□□ -0.21
TOP3A-213ENST00000582230 Q9H8V8 135 aa13.77□□□□□ -0.21
TOP3A-213ENST00000582230 TRAV26-2A0A0B4J265 109 aa13.76□□□□□ -0.21
TOP3A-213ENST00000582230 S100PP25815 95 aa13.76□□□□□ -0.21
TOP3A-213ENST00000582230 LELP1Q5T871 98 aa13.76□□□□□ -0.21
TOP3A-213ENST00000582230 FAM104BQ5XKR9 115 aa13.76□□□□□ -0.21
TOP3A-213ENST00000582230 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
TOP3A-213ENST00000582230 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
TOP3A-213ENST00000582230 TRAV9-1A0A075B6T8 112 aa13.75□□□□□ -0.21
TOP3A-213ENST00000582230 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
TOP3A-213ENST00000582230 SIVA1O15304 175 aa13.74□□□□□ -0.21
TOP3A-213ENST00000582230 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
TOP3A-213ENST00000582230 OR10J3Q5JRS4 329 aa13.73□□□□□ -0.21
TOP3A-213ENST00000582230 IGLV2-18A0A075B6J9 118 aa13.72□□□□□ -0.21
TOP3A-213ENST00000582230 PPP1R17O96001 155 aa13.72□□□□□ -0.21
TOP3A-213ENST00000582230 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.21
TOP3A-213ENST00000582230 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
TOP3A-213ENST00000582230 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
TOP3A-213ENST00000582230 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
TOP3A-213ENST00000582230 TTC32Q5I0X7 151 aa13.7□□□□□ -0.22
TOP3A-213ENST00000582230 WFDC10BQ8IUB3 73 aa13.7□□□□□ -0.22
TOP3A-213ENST00000582230 URGCP-MRPS24S4R325 110 aa13.7□□□□□ -0.22
TOP3A-213ENST00000582230 TRBV6-8A0A0A6YYG3 113 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 NBDYA0A0U1RRE5 68 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 K7EP13 123 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 DNAH10OSP0CZ25 163 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 Q6ZR54 194 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 KMT2CQ8NEZ4 4911 aaKnown RBP13.69□□□□□ -0.22
TOP3A-213ENST00000582230 ALMS1Q8TCU4 4167 aa13.69□□□□□ -0.22
TOP3A-213ENST00000582230 TRAV9-2A0A087WT02 112 aa13.68□□□□□ -0.22
TOP3A-213ENST00000582230 M0R2N4 97 aa13.68□□□□□ -0.22
TOP3A-213ENST00000582230 PPBPP02775 128 aa13.68□□□□□ -0.22
TOP3A-213ENST00000582230 CKS2P33552 79 aa13.68□□□□□ -0.22
TOP3A-213ENST00000582230 ST20Q9HBF5 79 aa13.68□□□□□ -0.22
TOP3A-213ENST00000582230 GAS8-AS1O95177 125 aa13.67□□□□□ -0.22
TOP3A-213ENST00000582230 LYSTQ99698 3801 aa13.67□□□□□ -0.22
TOP3A-213ENST00000582230 SDHAF1A6NFY7 115 aa13.66□□□□□ -0.22
TOP3A-213ENST00000582230 SMKR1H3BMG3 65 aa13.66□□□□□ -0.22
TOP3A-213ENST00000582230 NCR2O95944 276 aa13.66□□□□□ -0.22
TOP3A-213ENST00000582230 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
TOP3A-213ENST00000582230 LINC01556Q5JQF7 62 aa13.66□□□□□ -0.22
TOP3A-213ENST00000582230 COTL1Q14019 142 aa13.65□□□□□ -0.22
TOP3A-213ENST00000582230 COX19Q49B96 90 aa13.65□□□□□ -0.22
TOP3A-213ENST00000582230 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
TOP3A-213ENST00000582230 NRACQ8N912 160 aa13.65□□□□□ -0.22
TOP3A-213ENST00000582230 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
TOP3A-213ENST00000582230 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
TOP3A-213ENST00000582230 IGHV1-24A0A0C4DH33 117 aa13.64□□□□□ -0.23
TOP3A-213ENST00000582230 D6R8Y8 96 aa13.64□□□□□ -0.23
TOP3A-213ENST00000582230 TMEM136Q6ZRR5 245 aa13.64□□□□□ -0.23
TOP3A-213ENST00000582230 I3L3M4 83 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 PMCHP20382 165 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 POLR2KP53803 58 aaKnown RBP13.63□□□□□ -0.23
TOP3A-213ENST00000582230 PKIAP61925 76 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 SUMO2P61956 95 aaKnown RBP13.63□□□□□ -0.23
TOP3A-213ENST00000582230 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 ATRAIDQ6UW56 229 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 ORMDL3Q8N138 153 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 C10orf126Q8N4M7 172 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 C20orf78Q9BR46 151 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 TMEM70Q9BUB7 260 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 GNB1LQ9BYB4 327 aa13.63□□□□□ -0.23
TOP3A-213ENST00000582230 PHOX2AO14813 284 aa13.62□□□□□ -0.23
TOP3A-213ENST00000582230 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
TOP3A-213ENST00000582230 BTF3P20290 206 aaKnown RBP13.62□□□□□ -0.23
TOP3A-213ENST00000582230 NIT1Q86X76 327 aa13.62□□□□□ -0.23
TOP3A-213ENST00000582230 CHCHD5Q9BSY4 110 aa13.62□□□□□ -0.23
TOP3A-213ENST00000582230 TRBV27A0A0K0K1C4 114 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 VCYO14598 125 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 TNFRSF6BO95407 300 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 ELOBQ15370 118 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 KRTAP1-5Q9BYS1 174 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
TOP3A-213ENST00000582230 AMTP48728 403 aa13.6□□□□□ -0.23
TOP3A-213ENST00000582230 RPL32P62910 135 aaKnown RBP13.6□□□□□ -0.23
TOP3A-213ENST00000582230 PRELID3AQ96N28 172 aa13.6□□□□□ -0.23
TOP3A-213ENST00000582230 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
TOP3A-213ENST00000582230 LAMTOR2Q9Y2Q5 125 aa13.6□□□□□ -0.23
TOP3A-213ENST00000582230 VPS13DQ5THJ4 4388 aa13.6□□□□□ -0.23
TOP3A-213ENST00000582230 A0A087WX48 190 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms