RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CCL18P55774 89 aa10.41□□□□□ -0.74
MKS1-210ENST00000581180 HBBP68871 147 aa10.41□□□□□ -0.74
MKS1-210ENST00000581180 LYPD5Q6UWN5 251 aa10.41□□□□□ -0.74
MKS1-210ENST00000581180 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 H7C1H1 209 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 RAB4AP20338 218 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 TIRAPP58753 221 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 UBE2D3P61077 147 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 UBE2D2P62837 147 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 AMN1Q8IY45 258 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 ATP6V0E2Q8NHE4 81 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 FRZBQ92765 325 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 BTF3L4Q96K17 158 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.74
MKS1-210ENST00000581180 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 S100A8P05109 93 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
MKS1-210ENST00000581180 FAM104BQ5XKR9 115 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 RASL11AQ6T310 242 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
MKS1-210ENST00000581180 DNAJC30Q96LL9 226 aa10.39□□□□□ -0.75
MKS1-210ENST00000581180 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
MKS1-210ENST00000581180 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
MKS1-210ENST00000581180 UPK3BQ9BT76 320 aa10.38□□□□□ -0.75
MKS1-210ENST00000581180 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
MKS1-210ENST00000581180 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
MKS1-210ENST00000581180 GTSF1LQ9H1H1 148 aa10.37□□□□□ -0.75
MKS1-210ENST00000581180 NIT2Q9NQR4 276 aa10.37□□□□□ -0.75
MKS1-210ENST00000581180 RYR2Q92736 4967 aa10.37□□□□□ -0.75
MKS1-210ENST00000581180 S100PP25815 95 aa10.36□□□□□ -0.75
MKS1-210ENST00000581180 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
MKS1-210ENST00000581180 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
MKS1-210ENST00000581180 TNFRSF18Q9Y5U5 241 aa10.36□□□□□ -0.75
MKS1-210ENST00000581180 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
MKS1-210ENST00000581180 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
MKS1-210ENST00000581180 SMKR1H3BMG3 65 aa10.34□□□□□ -0.75
MKS1-210ENST00000581180 RPS10P46783 165 aaKnown RBP10.34□□□□□ -0.75
MKS1-210ENST00000581180 LELP1Q5T871 98 aa10.34□□□□□ -0.75
MKS1-210ENST00000581180 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
MKS1-210ENST00000581180 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
MKS1-210ENST00000581180 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 NCR2O95944 276 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 ELOBQ15370 118 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 NRACQ8N912 160 aa10.33□□□□□ -0.76
MKS1-210ENST00000581180 YPEL4Q96NS1 127 aa10.32□□□□□ -0.76
MKS1-210ENST00000581180 Q9H8V8 135 aa10.32□□□□□ -0.76
MKS1-210ENST00000581180 CKS2P33552 79 aa10.31□□□□□ -0.76
MKS1-210ENST00000581180 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
MKS1-210ENST00000581180 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
MKS1-210ENST00000581180 RYR3Q15413 4870 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 TRBV24-1A0A075B6N3 115 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 TGIF2-C20orf24A0A0A6YYL0 155 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 D6R8Y8 96 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 SIVA1O15304 175 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 PPP1R17O96001 155 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
MKS1-210ENST00000581180 COX19Q49B96 90 aa10.3□□□□□ -0.76
MKS1-210ENST00000581180 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 TRAV8-6A0A0B4J262 113 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 PPBPP02775 128 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
MKS1-210ENST00000581180 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 GNB1LQ9BYB4 327 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
MKS1-210ENST00000581180 HLA-DQA1P01909 254 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 Q6ZR54 194 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 SMCO4Q9NRQ5 59 aa10.28□□□□□ -0.76
MKS1-210ENST00000581180 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 PHOX2AO14813 284 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 NPYP01303 97 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.77
MKS1-210ENST00000581180 IQCJQ1A5X6 159 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
MKS1-210ENST00000581180 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
MKS1-210ENST00000581180 COTL1Q14019 142 aa10.26□□□□□ -0.77
MKS1-210ENST00000581180 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
MKS1-210ENST00000581180 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
MKS1-210ENST00000581180 KRTAP1-5Q9BYS1 174 aa10.26□□□□□ -0.77
MKS1-210ENST00000581180 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 I3L3M4 83 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 M0R2N4 97 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 APCSP02743 223 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 MT-ND6P03923 174 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 KIAA1644Q3SXP7 199 aa10.25□□□□□ -0.77
MKS1-210ENST00000581180 NIT1Q86X76 327 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms