RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 A0A087WX48 190 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 K7EN84 100 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 NIT1Q86X76 327 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
SREBF1-219ENST00000580540 RPP21Q9H633 154 aaKnown RBP11.12□□□□□ -0.63
SREBF1-219ENST00000580540 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
SREBF1-219ENST00000580540 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
SREBF1-219ENST00000580540 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
SREBF1-219ENST00000580540 TRBV6-8A0A0A6YYG3 113 aa11.1□□□□□ -0.63
SREBF1-219ENST00000580540 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
SREBF1-219ENST00000580540 NTF3P20783 257 aa11.1□□□□□ -0.63
SREBF1-219ENST00000580540 LRCOL1A6NCL2 159 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 H7C1H1 209 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
SREBF1-219ENST00000580540 TWIST1Q15672 202 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
SREBF1-219ENST00000580540 M0QY20 66 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 ELOBQ15370 118 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 DNAJC30Q96LL9 226 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 SMIM7Q9BQ49 75 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
SREBF1-219ENST00000580540 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 IGLV5-52A0A0A0MRZ9 124 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 LECT2O14960 151 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 CTRLP40313 264 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 RMI2Q96E14 147 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 FAM210AQ96ND0 272 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
SREBF1-219ENST00000580540 GCSHP23434 173 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 KRTAP10-1P60331 282 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 WDR73Q6P4I2 378 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 Q8N814 137 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 C15orf54Q8N8G6 183 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
SREBF1-219ENST00000580540 ZNF727A8MUV8 499 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 RASL11AQ6T310 242 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 GTSF1Q8WW33 167 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 KRTAP4-5Q9BYR2 181 aa11.05□□□□□ -0.64
SREBF1-219ENST00000580540 TRBV25-1A0A075B6N4 114 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 A8MWL6 223 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
SREBF1-219ENST00000580540 GAGE6Q13070 117 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 WFDC2Q14508 124 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 MPV17L2Q567V2 206 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 SMIM15Q7Z3B0 74 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 PGLYRP4Q96LB8 373 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 PCLOQ9Y6V0 5065 aa11.04□□□□□ -0.64
SREBF1-219ENST00000580540 CRPP02741 224 aa11.03□□□□□ -0.64
SREBF1-219ENST00000580540 ANGP03950 147 aaKnown RBP11.03□□□□□ -0.64
SREBF1-219ENST00000580540 PKIAP61925 76 aa11.03□□□□□ -0.64
SREBF1-219ENST00000580540 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
SREBF1-219ENST00000580540 DEFB104AQ8WTQ1 72 aa11.03□□□□□ -0.64
SREBF1-219ENST00000580540 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
SREBF1-219ENST00000580540 Q0VG73 95 aa11.02□□□□□ -0.65
SREBF1-219ENST00000580540 LINC01551Q86U37 167 aa11.02□□□□□ -0.65
SREBF1-219ENST00000580540 Q8N976 141 aa11.02□□□□□ -0.65
SREBF1-219ENST00000580540 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
SREBF1-219ENST00000580540 NIT2Q9NQR4 276 aa11.02□□□□□ -0.65
SREBF1-219ENST00000580540 IGHV1-24A0A0C4DH33 117 aa11.01□□□□□ -0.65
SREBF1-219ENST00000580540 NDUFS6O75380 124 aaKnown RBP11.01□□□□□ -0.65
SREBF1-219ENST00000580540 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
SREBF1-219ENST00000580540 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
SREBF1-219ENST00000580540 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
SREBF1-219ENST00000580540 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 TEX261Q6UWH6 196 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 ENHOQ6UWT2 76 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 Q8N1X5 172 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 C1orf43Q9BWL3 253 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 ABCA13Q86UQ4 5058 aa11□□□□□ -0.65
SREBF1-219ENST00000580540 RBX1P62877 108 aa10.99□□□□□ -0.65
SREBF1-219ENST00000580540 IQCJQ1A5X6 159 aa10.99□□□□□ -0.65
SREBF1-219ENST00000580540 CT83Q5H943 113 aa10.99□□□□□ -0.65
SREBF1-219ENST00000580540 CLPSL2Q6UWE3 100 aa10.99□□□□□ -0.65
SREBF1-219ENST00000580540 GATD1Q8NB37 220 aa10.99□□□□□ -0.65
SREBF1-219ENST00000580540 XGP55808 180 aa10.98□□□□□ -0.65
SREBF1-219ENST00000580540 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
SREBF1-219ENST00000580540 TMEM243Q9BU79 118 aa10.98□□□□□ -0.65
SREBF1-219ENST00000580540 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
SREBF1-219ENST00000580540 HAMPP81172 84 aa10.97□□□□□ -0.65
SREBF1-219ENST00000580540 COTL1Q14019 142 aa10.97□□□□□ -0.65
SREBF1-219ENST00000580540 PEA15Q15121 130 aa10.97□□□□□ -0.65
SREBF1-219ENST00000580540 LINC00269Q8N2A0 174 aa10.97□□□□□ -0.65
SREBF1-219ENST00000580540 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
SREBF1-219ENST00000580540 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
SREBF1-219ENST00000580540 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 C9JQL5 133 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 UBE2L6O14933 153 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 AMTP48728 403 aa10.96□□□□□ -0.65
SREBF1-219ENST00000580540 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms