RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 TRBV25-1A0A075B6N4 114 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 TRAV34A0A0B4J273 112 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 CHTF8P0CG12 524 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 H2BFSP57053 126 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SERF2P84101 59 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 CLPSL2Q6UWE3 100 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 Q86TA4 180 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 GTSF1Q8WW33 167 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 HIST1H2BAQ96A08 127 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 PSMG3Q9BT73 122 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 WFDC1Q9HC57 220 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 VAX2Q9UIW0 290 aa7.69□□□□□ -1.18
CDK5RAP3-216ENST00000579853 LPAP08519 4548 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 PEX7O00628 323 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SH2D1AO60880 128 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 CRIP1P50238 77 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 REG3AQ06141 175 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ENKURQ8TC29 256 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 DERL1Q9BUN8 251 aa7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ACTR3CQ9C0K3 210 aaPredicted RBP7.68□□□□□ -1.18
CDK5RAP3-216ENST00000579853 IGLV10-54A0A075B6I4 117 aa7.67□□□□□ -1.18
CDK5RAP3-216ENST00000579853 TRBV6-1A0A0K0K1D8 114 aa7.67□□□□□ -1.18
CDK5RAP3-216ENST00000579853 GAGE6Q13070 117 aa7.67□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ZNF674Q2M3X9 581 aa7.67□□□□□ -1.18
CDK5RAP3-216ENST00000579853 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
CDK5RAP3-216ENST00000579853 TMSB15BA0A087X1C1 80 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 NDUFS6O75380 124 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 IQCJQ1A5X6 159 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 CFAP161Q6P656 301 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 LINC00299Q6ZSB3 139 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 FMC1Q96HJ9 113 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ZNF471Q9BX82 626 aaPredicted RBP7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
CDK5RAP3-216ENST00000579853 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 F5H697 171 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SSNA1O43805 119 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 SLPIP03973 132 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ATP6V0CP27449 155 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 RPS10P46783 165 aaKnown RBP7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 UBE2G1P62253 170 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ODF1Q14990 250 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 MAJINQ3KP22 176 aa7.65□□□□□ -1.18
CDK5RAP3-216ENST00000579853 MUC2Q02817 5179 aa7.65□□□□□ -1.19
CDK5RAP3-216ENST00000579853 INMT-MINDY4F8WBC2 141 aa7.64□□□□□ -1.19
CDK5RAP3-216ENST00000579853 COX6A2Q02221 97 aa7.64□□□□□ -1.19
CDK5RAP3-216ENST00000579853 PKIGQ9Y2B9 76 aa7.64□□□□□ -1.19
CDK5RAP3-216ENST00000579853 CXCL1P09341 107 aa7.63□□□□□ -1.19
CDK5RAP3-216ENST00000579853 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
CDK5RAP3-216ENST00000579853 STPG4Q8N801 248 aa7.63□□□□□ -1.19
CDK5RAP3-216ENST00000579853 TCEAL7Q9BRU2 100 aa7.63□□□□□ -1.19
CDK5RAP3-216ENST00000579853 LINC00474Q9P2X8 69 aa7.63□□□□□ -1.19
CDK5RAP3-216ENST00000579853 UBE2G2P60604 165 aa7.62□□□□□ -1.19
CDK5RAP3-216ENST00000579853 SPANXN1Q5VSR9 72 aa7.62□□□□□ -1.19
CDK5RAP3-216ENST00000579853 C20orf203Q8NBC4 194 aa7.62□□□□□ -1.19
CDK5RAP3-216ENST00000579853 OR10AG1Q8NH19 301 aa7.62□□□□□ -1.19
CDK5RAP3-216ENST00000579853 IGKV2-24A0A0C4DH68 120 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 CTXND1A0A1B0GTU2 59 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 FAM74A7A6NL05 159 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 H7C1H1 209 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 LTAP01374 205 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 OR5AL1P0C617 328 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 Q6ZRP5 223 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 LYPD6BQ8NI32 183 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 AQP10Q96PS8 301 aa7.61□□□□□ -1.19
CDK5RAP3-216ENST00000579853 SNAI2O43623 268 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 SULT1A2P50226 295 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 RAB5CP51148 216 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 S100ZQ8WXG8 99 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 TMEM243Q9BU79 118 aa7.6□□□□□ -1.19
CDK5RAP3-216ENST00000579853 FAM231BA6NCW3 169 aa7.59□□□□□ -1.19
CDK5RAP3-216ENST00000579853 UBE2L6O14933 153 aa7.59□□□□□ -1.19
CDK5RAP3-216ENST00000579853 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
CDK5RAP3-216ENST00000579853 A0A0U1RQV1 116 aa7.58□□□□□ -1.2
CDK5RAP3-216ENST00000579853 S100A9P06702 114 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-216ENST00000579853 FHITP49789 147 aa7.58□□□□□ -1.2
CDK5RAP3-216ENST00000579853 GAGE12HA6NDE8 117 aa7.57□□□□□ -1.2
CDK5RAP3-216ENST00000579853 AKR1C3P42330 323 aa7.57□□□□□ -1.2
CDK5RAP3-216ENST00000579853 ZNF726P1Q15940 193 aa7.57□□□□□ -1.2
CDK5RAP3-216ENST00000579853 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
CDK5RAP3-216ENST00000579853 GFRA4Q9GZZ7 299 aa7.57□□□□□ -1.2
CDK5RAP3-216ENST00000579853 A0A096LNI7 61 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 GVQW2A0A096LPI5 108 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MUC21A0A0G2JKD1 596 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 M0QY20 66 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 UPK1BO75841 260 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 ZNF664Q8N3J9 261 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 STOML3Q8TAV4 291 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms