RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 LINC01006Q8NI28 216 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 ICOSQ9Y6W8 199 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 ADGRB2O60241 1585 aa4.38□□□□□ -1.71
COPS3-216ENST00000579716 COL14A1Q05707 1796 aaKnown RBP4.37□□□□□ -1.71
COPS3-216ENST00000579716 CD163L1Q9NR16 1453 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 MGAMO43451 1857 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 PLXNA3P51805 1871 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 KIF21BO75037 1637 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 SDHAF1A6NFY7 115 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 U3KQK5 164 aa4.37□□□□□ -1.71
COPS3-216ENST00000579716 TMEM14DPA8MWL7 114 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 INSP01308 110 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 CLPSP04118 112 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 FAM27BQ5VT28 67 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 Q6ZQT0 140 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 C1orf64Q8NEQ6 169 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 CIRBP-AS1Q8TBR5 109 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 LTBP2Q14767 1821 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 NUMA1Q14980 2115 aa4.36□□□□□ -1.71
COPS3-216ENST00000579716 ARID1AO14497 2285 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 RREB1Q92766 1687 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 TEX49A0A1B0GTD5 131 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 H7C2G1 150 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 MGST1P10620 155 aaKnown RBP4.35□□□□□ -1.71
COPS3-216ENST00000579716 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
COPS3-216ENST00000579716 Q5VV11 94 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 LYZL1Q6UWQ5 148 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 UBE2D4Q9Y2X8 147 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 COL4A6Q14031 1691 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 QSER1Q2KHR3 1735 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 WDR90Q96KV7 1748 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 CPAMD8Q8IZJ3 1885 aa4.35□□□□□ -1.71
COPS3-216ENST00000579716 ANKRD12Q6UB98 2062 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 H3BPC8 53 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 UBE2D1P51668 147 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 SPANXN5Q5MJ07 72 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 MIR7-3HGQ8N6C7 128 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 FGF22Q9HCT0 170 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
COPS3-216ENST00000579716 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.34□□□□□ -1.71
COPS3-216ENST00000579716 MYO9BQ13459 2157 aa4.34□□□□□ -1.72
COPS3-216ENST00000579716 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
COPS3-216ENST00000579716 A0A087WSZ3 146 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 E7EUB6 86 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 DNAH10OSP0CZ25 163 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 PRB4P10163 310 aaPredicted RBP4.33□□□□□ -1.72
COPS3-216ENST00000579716 NNATQ16517 81 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 SFTA2Q6UW10 78 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 LINC01560Q8TB33 94 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 KIAA2026Q5HYC2 2103 aa4.33□□□□□ -1.72
COPS3-216ENST00000579716 PPYP01298 95 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 PATE4P0C8F1 98 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 SNRPGP62308 76 aaKnown RBP4.32□□□□□ -1.72
COPS3-216ENST00000579716 MOBPQ13875 183 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 C14orf178Q8N769 122 aaPredicted RBP4.32□□□□□ -1.72
COPS3-216ENST00000579716 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 PROK2Q9HC23 129 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 PSENENQ9NZ42 101 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 TMEM14AQ9Y6G1 99 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 ADAMTS7Q9UKP4 1686 aa4.32□□□□□ -1.72
COPS3-216ENST00000579716 TUBGCP6Q96RT7 1819 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 IGLV10-54A0A075B6I4 117 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 ZNF22P17026 224 aaPredicted RBP4.31□□□□□ -1.72
COPS3-216ENST00000579716 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 IGLV3-21P80748 117 aaPredicted RBP4.31□□□□□ -1.72
COPS3-216ENST00000579716 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 C22orf24Q9Y442 160 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 FAM215AQ9Y5M1 114 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 NRXN3Q9Y4C0 1643 aa4.31□□□□□ -1.72
COPS3-216ENST00000579716 PLXNA2O75051 1894 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 TRAV1-2A0A0B4J238 106 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 C17orf98A8MV24 154 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 DEFA4P12838 97 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 ZCCHC23Q6ZST2 131 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 S4R3C0 116 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 LRP5O75197 1615 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 SAMD9LQ8IVG5 1584 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 ZNF236Q9UL36 1845 aa4.3□□□□□ -1.72
COPS3-216ENST00000579716 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
COPS3-216ENST00000579716 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
COPS3-216ENST00000579716 IGKV1OR2-108A0A075B7D4 117 aa4.29□□□□□ -1.72
COPS3-216ENST00000579716 LHBP01229 141 aa4.29□□□□□ -1.72
COPS3-216ENST00000579716 SPINT3P49223 89 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms