RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 MT-ND6P03923 174 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 AMN1Q8IY45 258 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 RNF185Q96GF1 192 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 GNB1LQ9BYB4 327 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 URGCP-MRPS24S4R325 110 aa9.63□□□□□ -0.87
LINC01543-201ENST00000578367 TRBV6-5A0A0K0K1A5 114 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 PHOX2AO14813 284 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 UBE2D3P61077 147 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 UBE2D2P62837 147 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
LINC01543-201ENST00000578367 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
LINC01543-201ENST00000578367 TNFRSF18Q9Y5U5 241 aa9.62□□□□□ -0.87
LINC01543-201ENST00000578367 ELOBQ15370 118 aa9.61□□□□□ -0.87
LINC01543-201ENST00000578367 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
LINC01543-201ENST00000578367 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
LINC01543-201ENST00000578367 GTSF1LQ9H1H1 148 aa9.61□□□□□ -0.87
LINC01543-201ENST00000578367 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
LINC01543-201ENST00000578367 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
LINC01543-201ENST00000578367 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 GAGE1Q13065 139 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 GAGE4Q13068 117 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 GAGE5Q13069 117 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
LINC01543-201ENST00000578367 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
LINC01543-201ENST00000578367 CKS2P33552 79 aa9.59□□□□□ -0.87
LINC01543-201ENST00000578367 LYPD5Q6UWN5 251 aa9.59□□□□□ -0.87
LINC01543-201ENST00000578367 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
LINC01543-201ENST00000578367 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
LINC01543-201ENST00000578367 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
LINC01543-201ENST00000578367 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
LINC01543-201ENST00000578367 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
LINC01543-201ENST00000578367 ESRGQ1W209 222 aa9.58□□□□□ -0.88
LINC01543-201ENST00000578367 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
LINC01543-201ENST00000578367 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
LINC01543-201ENST00000578367 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 TCAPO15273 167 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 LELP1Q5T871 98 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 Q9UF83 564 aa9.57□□□□□ -0.88
LINC01543-201ENST00000578367 K7EP13 123 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 NCR2O95944 276 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 APCSP02743 223 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 PKIAP61925 76 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 NRACQ8N912 160 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
LINC01543-201ENST00000578367 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 TRAV8-6A0A0B4J262 113 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 TRBV27A0A0K0K1C4 114 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 PRSS47A8MTI9 375 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 D6R8Y8 96 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 VCYO14598 125 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 ATP6V1G1O75348 118 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
LINC01543-201ENST00000578367 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
LINC01543-201ENST00000578367 CBLN2Q8IUK8 224 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
LINC01543-201ENST00000578367 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 LCE6AA0A183 80 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 I3L3M4 83 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 COTL1Q14019 142 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
LINC01543-201ENST00000578367 TMEM70Q9BUB7 260 aa9.54□□□□□ -0.88
LINC01543-201ENST00000578367 TENM2Q9NT68 2774 aa9.53□□□□□ -0.88
LINC01543-201ENST00000578367 RPS10P46783 165 aaKnown RBP9.53□□□□□ -0.88
LINC01543-201ENST00000578367 IQCJQ1A5X6 159 aa9.53□□□□□ -0.88
LINC01543-201ENST00000578367 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
LINC01543-201ENST00000578367 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
LINC01543-201ENST00000578367 TRBV25-1A0A075B6N4 114 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 K7EMI3 77 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 LY6G6CO95867 125 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 PMCHP20382 165 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
LINC01543-201ENST00000578367 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
LINC01543-201ENST00000578367 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 H7C423 109 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 SIVA1O15304 175 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 GAS8-AS1O95177 125 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
LINC01543-201ENST00000578367 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 MAP1LC3AQ9H492 121 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 Q9H8V8 135 aa9.51□□□□□ -0.89
LINC01543-201ENST00000578367 TRAV9-2A0A087WT02 112 aa9.5□□□□□ -0.89
LINC01543-201ENST00000578367 COLCA2A8K830 154 aa9.5□□□□□ -0.89
LINC01543-201ENST00000578367 NPYP01303 97 aa9.5□□□□□ -0.89
LINC01543-201ENST00000578367 DNAH10OSP0CZ25 163 aa9.5□□□□□ -0.89
LINC01543-201ENST00000578367 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms