RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TRGC1P0CF51 173 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 EVI2AP22794 236 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 RAB14P61106 215 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 TMEM241Q24JQ0 296 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 OSTCQ9NRP0 149 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 NAT8Q9UHE5 227 aa8.66□□□□□ -1.02
CCDC57-211ENST00000578187 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 A8MWL6 223 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 NTF3P20783 257 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 UBE2D3P61077 147 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.02
CCDC57-211ENST00000578187 UBE2D2P62837 147 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
CCDC57-211ENST00000578187 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 Q8N1X5 172 aa8.65□□□□□ -1.02
CCDC57-211ENST00000578187 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
CCDC57-211ENST00000578187 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 TRAV8-6A0A0B4J262 113 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 IGHV3-38A0A0C4DH36 116 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 F5H697 171 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 MGPP08493 103 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
CCDC57-211ENST00000578187 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 IFITM2Q01629 132 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 OR10J3Q5JRS4 329 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 GFRA4Q9GZZ7 299 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
CCDC57-211ENST00000578187 A0A087WWC5 75 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 TWIST1Q15672 202 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 ADIRFQ15847 76 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
CCDC57-211ENST00000578187 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 C15orf54Q8N8G6 183 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 MRPL18Q9H0U6 180 aaKnown RBP8.63□□□□□ -1.03
CCDC57-211ENST00000578187 V9GYV3 84 aa8.63□□□□□ -1.03
CCDC57-211ENST00000578187 DYNC1H1Q14204 4646 aaKnown RBP8.62□□□□□ -1.03
CCDC57-211ENST00000578187 M0QY20 66 aa8.62□□□□□ -1.03
CCDC57-211ENST00000578187 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
CCDC57-211ENST00000578187 HIGD1CA8MV81 97 aa8.61□□□□□ -1.03
CCDC57-211ENST00000578187 H7C1H1 209 aa8.61□□□□□ -1.03
CCDC57-211ENST00000578187 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
CCDC57-211ENST00000578187 PSCAO43653 123 aa8.59□□□□□ -1.03
CCDC57-211ENST00000578187 RASL11AQ6T310 242 aa8.59□□□□□ -1.03
CCDC57-211ENST00000578187 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
CCDC57-211ENST00000578187 BORCS7Q96B45 105 aa8.59□□□□□ -1.03
CCDC57-211ENST00000578187 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
CCDC57-211ENST00000578187 RYR1P21817 5038 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 A0A087WTM6 91 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 A0A1B0GUT8 65 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 IBA57-AS1B1ANH7 110 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 IGHV3-30P01768 117 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 IGHV3-33P01772 117 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 IGHV3-30-3P0DP02 117 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 IGHV3-30-5P0DP03 117 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 SMIM15Q7Z3B0 74 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 Q8N3U1 123 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
CCDC57-211ENST00000578187 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 EPM2AB3EWF7 344 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 LAGE3Q14657 143 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 TMEM97Q5BJF2 176 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 NIT1Q86X76 327 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.57□□□□□ -1.04
CCDC57-211ENST00000578187 FRZBQ92765 325 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 NIT2Q9NQR4 276 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 NAT8BQ9UHF3 227 aa8.57□□□□□ -1.04
CCDC57-211ENST00000578187 PNRC1Q12796 327 aaPredicted RBP8.56□□□□□ -1.04
CCDC57-211ENST00000578187 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
CCDC57-211ENST00000578187 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
CCDC57-211ENST00000578187 TMEM191AQ9H0A3 160 aa8.56□□□□□ -1.04
CCDC57-211ENST00000578187 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
CCDC57-211ENST00000578187 RIGQ13278 110 aa8.55□□□□□ -1.04
CCDC57-211ENST00000578187 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
CCDC57-211ENST00000578187 URGCP-MRPS24S4R325 110 aa8.55□□□□□ -1.04
CCDC57-211ENST00000578187 HSPG2P98160 4391 aa8.55□□□□□ -1.04
CCDC57-211ENST00000578187 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
CCDC57-211ENST00000578187 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 A0A087WX48 190 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 GCSHP23434 173 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC57-211ENST00000578187 PKIAP61925 76 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
CCDC57-211ENST00000578187 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
CCDC57-211ENST00000578187 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 Q9HAA7 133 aa8.53□□□□□ -1.04
CCDC57-211ENST00000578187 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms