RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
CCDC40-214ENST00000575431 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
CCDC40-214ENST00000575431 NIT2Q9NQR4 276 aa6.56□□□□□ -1.36
CCDC40-214ENST00000575431 DAZ3Q9NR90 486 aaKnown RBP6.56□□□□□ -1.36
CCDC40-214ENST00000575431 IGHV3-38A0A0C4DH36 116 aa6.55□□□□□ -1.36
CCDC40-214ENST00000575431 DNAH10OSP0CZ25 163 aa6.55□□□□□ -1.36
CCDC40-214ENST00000575431 OR10J3Q5JRS4 329 aa6.55□□□□□ -1.36
CCDC40-214ENST00000575431 CTDSP1Q9GZU7 261 aa6.55□□□□□ -1.36
CCDC40-214ENST00000575431 M0R2N4 97 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 PPP1R17O96001 155 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 C10orf91Q5T1B1 145 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 KCNIP4Q6PIL6 250 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 ATP5L2Q7Z4Y8 100 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 C10orf126Q8N4M7 172 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 MRAP2Q96G30 205 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 IMMP2LQ96T52 175 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 Q9UF83 564 aa6.54□□□□□ -1.36
CCDC40-214ENST00000575431 KMT2CQ8NEZ4 4911 aaKnown RBP6.54□□□□□ -1.36
CCDC40-214ENST00000575431 PKIAP61925 76 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 NDUFA5Q16718 116 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 LINC01556Q5JQF7 62 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 TMEM242Q9NWH2 141 aa6.53□□□□□ -1.36
CCDC40-214ENST00000575431 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
CCDC40-214ENST00000575431 TRBV6-8A0A0A6YYG3 113 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 RAB4AP20338 218 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 CAMPP49913 170 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 HBBP68871 147 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 BTF3L4Q96K17 158 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 CHCHD7Q9BUK0 85 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
CCDC40-214ENST00000575431 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
CCDC40-214ENST00000575431 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
CCDC40-214ENST00000575431 TRAV9-1A0A075B6T8 112 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 RHEBQ15382 184 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 NFE4Q86UQ8 179 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 AMN1Q8IY45 258 aa6.51□□□□□ -1.37
CCDC40-214ENST00000575431 TRBV25-1A0A075B6N4 114 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 NCR2O95944 276 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 S100PP25815 95 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 ELOBQ15370 118 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 IQCJQ1A5X6 159 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 MRPL54Q6P161 138 aaKnown RBP6.5□□□□□ -1.37
CCDC40-214ENST00000575431 CLRN3Q8NCR9 226 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 RNF185Q96GF1 192 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 RYR2Q92736 4967 aa6.5□□□□□ -1.37
CCDC40-214ENST00000575431 A0A087WX48 190 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 IGHV1-24A0A0C4DH33 117 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 C7orf77A4D0Y5 90 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 SNAPINO95295 136 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 PPBPP02775 128 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 COTL1Q14019 142 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 LAGE3Q14657 143 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 NIT1Q86X76 327 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 SVBPQ8N300 66 aa6.49□□□□□ -1.37
CCDC40-214ENST00000575431 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 SDHAF1A6NFY7 115 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 I3L3M4 83 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 RTL8CO15255 209 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 CKS2P33552 79 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 COX19Q49B96 90 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 NTM-AS1Q6ZSK4 140 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 RPL39LQ96EH5 51 aaKnown RBP6.48□□□□□ -1.37
CCDC40-214ENST00000575431 CHCHD5Q9BSY4 110 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
CCDC40-214ENST00000575431 TRBV24-1A0A075B6N3 115 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TRAV8-3A0A0A6YYJ7 113 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 PRSS29PA6NIE9 313 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TMEM262E9PQX1 116 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 H7C423 109 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 VCYO14598 125 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 PHOX2AO14813 284 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 APOC3P02656 99 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 PMCHP20382 165 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 SUMO2P61956 95 aaKnown RBP6.47□□□□□ -1.37
CCDC40-214ENST00000575431 MRPL51Q4U2R6 128 aaKnown RBP6.47□□□□□ -1.37
CCDC40-214ENST00000575431 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TMEM243Q9BU79 118 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TMEM70Q9BUB7 260 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 RPS10P5Q9NQ39 176 aa6.47□□□□□ -1.37
CCDC40-214ENST00000575431 TCAPO15273 167 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 AMTP48728 403 aa6.46□□□□□ -1.38
CCDC40-214ENST00000575431 POLR2KP53803 58 aaKnown RBP6.46□□□□□ -1.38
CCDC40-214ENST00000575431 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms