RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SMIM7Q9BQ49 75 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 DAZ3Q9NR90 486 aaKnown RBP5.77□□□□□ -1.49
SMG6-216ENST00000575176 V9GYV3 84 aa5.77□□□□□ -1.49
SMG6-216ENST00000575176 F2Z2F3 143 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 GAS8-AS1O95177 125 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 IGHV3-30-3P0DP02 117 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 NTF3P20783 257 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 CACNG7P62955 275 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 ATRAIDQ6UW56 229 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 ISOC2Q96AB3 205 aa5.76□□□□□ -1.49
SMG6-216ENST00000575176 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 TRAV8-6A0A0B4J262 113 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 CDK2AP2O75956 126 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 SSTP61278 116 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 RPL23P62829 140 aaKnown RBP5.75□□□□□ -1.49
SMG6-216ENST00000575176 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
SMG6-216ENST00000575176 IFITM2Q01629 132 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 MPV17L2Q567V2 206 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
SMG6-216ENST00000575176 TPPP3Q9BW30 176 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 BIN3Q9NQY0 253 aa5.75□□□□□ -1.49
SMG6-216ENST00000575176 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
SMG6-216ENST00000575176 A0A087WWC5 75 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 ZNF727A8MUV8 499 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 C16orf90A8MZG2 172 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 IQCJQ1A5X6 159 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 GATD1Q8NB37 220 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 DAZAP1Q96EP5 407 aaKnown RBP5.74□□□□□ -1.49
SMG6-216ENST00000575176 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 EIF5A2Q9GZV4 153 aaKnown RBP5.74□□□□□ -1.49
SMG6-216ENST00000575176 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 OSTCQ9NRP0 149 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
SMG6-216ENST00000575176 XKRY2A2RUG3 117 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
SMG6-216ENST00000575176 MGPP08493 103 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 CEBPGP53567 150 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 ENHOQ6UWT2 76 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 TSKUQ8WUA8 353 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 RNF185Q96GF1 192 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 GFRA4Q9GZZ7 299 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 Q9HAA7 133 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
SMG6-216ENST00000575176 TRAV9-2A0A087WT02 112 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 FAM231BA6NCW3 169 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 HIGD1CA8MV81 97 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 TRGC1P0CF51 173 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 RPS10P46783 165 aaKnown RBP5.72□□□□□ -1.49
SMG6-216ENST00000575176 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 RASL11AQ6T310 242 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 Q8N976 141 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
SMG6-216ENST00000575176 PGLYRP4Q96LB8 373 aa5.72□□□□□ -1.49
SMG6-216ENST00000575176 SMIM27A0A1W2PRY6 76 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 A8MWL6 223 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 XGP55808 180 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 TWIST1Q15672 202 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 FAM74A3Q4VXF1 159 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 CDPF1Q6NVV7 123 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 Q8N814 137 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 C20orf203Q8NBC4 194 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 NUP35Q8NFH5 326 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 NTN5Q8WTR8 489 aaPredicted RBP5.71□□□□□ -1.5
SMG6-216ENST00000575176 SMDT1Q9H4I9 107 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 NIT2Q9NQR4 276 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 NAT8Q9UHE5 227 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 KLK12Q9UKR0 248 aa5.71□□□□□ -1.5
SMG6-216ENST00000575176 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 A0A1B0GXF2 115 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 F5H697 171 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 RBX1P62877 108 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 FRZBQ92765 325 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 TMEM191AQ9H0A3 160 aa5.7□□□□□ -1.5
SMG6-216ENST00000575176 IGLV4-60A0A075B6I1 120 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 H7C1H1 209 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 ADIRFQ15847 76 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 TMEM241Q24JQ0 296 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 CLLU1Q5K131 121 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 Q6ZSA8 131 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 NRACQ8N912 160 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 DEFB104AQ8WTQ1 72 aa5.69□□□□□ -1.5
SMG6-216ENST00000575176 HERC1Q15751 4861 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 TRAV8-3A0A0A6YYJ7 113 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 LECT2O14960 151 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 TSHBP01222 138 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 RAB4AP20338 218 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 GAGE6Q13070 117 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 PEA15Q15121 130 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 AMN1Q8IY45 258 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms