RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
CCNE1-204ENST00000574121 Q9UF83 564 aa10.84□□□□□ -0.67
CCNE1-204ENST00000574121 TRAV9-1A0A075B6T8 112 aa10.83□□□□□ -0.68
CCNE1-204ENST00000574121 UBE2D3P61077 147 aa10.83□□□□□ -0.68
CCNE1-204ENST00000574121 UBE2D2P62837 147 aa10.83□□□□□ -0.68
CCNE1-204ENST00000574121 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
CCNE1-204ENST00000574121 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.83□□□□□ -0.68
CCNE1-204ENST00000574121 ZNRF2Q8NHG8 242 aa10.83□□□□□ -0.68
CCNE1-204ENST00000574121 GTSF1LQ9H1H1 148 aa10.83□□□□□ -0.68
CCNE1-204ENST00000574121 DYNC2H1Q8NCM8 4307 aaKnown RBP10.83□□□□□ -0.68
CCNE1-204ENST00000574121 SLC7A5P1Q8MH63 180 aa10.82□□□□□ -0.68
CCNE1-204ENST00000574121 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
CCNE1-204ENST00000574121 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
CCNE1-204ENST00000574121 RPS10P5Q9NQ39 176 aa10.82□□□□□ -0.68
CCNE1-204ENST00000574121 NIT2Q9NQR4 276 aa10.82□□□□□ -0.68
CCNE1-204ENST00000574121 S100PP25815 95 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 CAMPP49913 170 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 DAZ4Q86SG3 579 aaKnown RBP10.81□□□□□ -0.68
CCNE1-204ENST00000574121 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 DAZ3Q9NR90 486 aaKnown RBP10.81□□□□□ -0.68
CCNE1-204ENST00000574121 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
CCNE1-204ENST00000574121 RAB4AP20338 218 aa10.8□□□□□ -0.68
CCNE1-204ENST00000574121 LELP1Q5T871 98 aa10.8□□□□□ -0.68
CCNE1-204ENST00000574121 PPP1R17O96001 155 aa10.79□□□□□ -0.68
CCNE1-204ENST00000574121 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
CCNE1-204ENST00000574121 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
CCNE1-204ENST00000574121 TRAV26-2A0A0B4J265 109 aa10.78□□□□□ -0.68
CCNE1-204ENST00000574121 Q9H8V8 135 aa10.78□□□□□ -0.68
CCNE1-204ENST00000574121 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
CCNE1-204ENST00000574121 SIVA1O15304 175 aa10.77□□□□□ -0.69
CCNE1-204ENST00000574121 K7EP13 123 aa10.76□□□□□ -0.69
CCNE1-204ENST00000574121 PPBPP02775 128 aa10.76□□□□□ -0.69
CCNE1-204ENST00000574121 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
CCNE1-204ENST00000574121 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
CCNE1-204ENST00000574121 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
CCNE1-204ENST00000574121 COX19Q49B96 90 aa10.75□□□□□ -0.69
CCNE1-204ENST00000574121 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
CCNE1-204ENST00000574121 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
CCNE1-204ENST00000574121 OR10J3Q5JRS4 329 aa10.75□□□□□ -0.69
CCNE1-204ENST00000574121 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
CCNE1-204ENST00000574121 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
CCNE1-204ENST00000574121 DNAH10OSP0CZ25 163 aa10.74□□□□□ -0.69
CCNE1-204ENST00000574121 CKS2P33552 79 aa10.74□□□□□ -0.69
CCNE1-204ENST00000574121 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
CCNE1-204ENST00000574121 NBDYA0A0U1RRE5 68 aa10.73□□□□□ -0.69
CCNE1-204ENST00000574121 SDHAF1A6NFY7 115 aa10.73□□□□□ -0.69
CCNE1-204ENST00000574121 PHOX2AO14813 284 aa10.73□□□□□ -0.69
CCNE1-204ENST00000574121 Q6ZR54 194 aa10.73□□□□□ -0.69
CCNE1-204ENST00000574121 ST20Q9HBF5 79 aa10.73□□□□□ -0.69
CCNE1-204ENST00000574121 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 TRBV24-1A0A075B6N3 115 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 GAS8-AS1O95177 125 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 RPS10P46783 165 aaKnown RBP10.72□□□□□ -0.69
CCNE1-204ENST00000574121 COTL1Q14019 142 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 NRACQ8N912 160 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
CCNE1-204ENST00000574121 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 D6R8Y8 96 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 NCR2O95944 276 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.69
CCNE1-204ENST00000574121 PKIAP61925 76 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.69
CCNE1-204ENST00000574121 IQCJQ1A5X6 159 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 TMEM136Q6ZRR5 245 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 C10orf126Q8N4M7 172 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 ALMS1Q8TCU4 4167 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
CCNE1-204ENST00000574121 IGHV1-24A0A0C4DH33 117 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 TRBV27A0A0K0K1C4 114 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 SMKR1H3BMG3 65 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 I3L3M4 83 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 MT-ND6P03923 174 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
CCNE1-204ENST00000574121 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
CCNE1-204ENST00000574121 ELOBQ15370 118 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 CHCHD7Q9BUK0 85 aa10.7□□□□□ -0.7
CCNE1-204ENST00000574121 KMT2CQ8NEZ4 4911 aaKnown RBP10.69□□□□□ -0.7
CCNE1-204ENST00000574121 VCYO14598 125 aa10.69□□□□□ -0.7
CCNE1-204ENST00000574121 TNFRSF6BO95407 300 aa10.69□□□□□ -0.7
CCNE1-204ENST00000574121 NIT1Q86X76 327 aa10.69□□□□□ -0.7
CCNE1-204ENST00000574121 SMCO4Q9NRQ5 59 aa10.69□□□□□ -0.7
CCNE1-204ENST00000574121 M0R2N4 97 aa10.68□□□□□ -0.7
CCNE1-204ENST00000574121 PMCHP20382 165 aa10.68□□□□□ -0.7
CCNE1-204ENST00000574121 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
CCNE1-204ENST00000574121 APCSP02743 223 aa10.67□□□□□ -0.7
CCNE1-204ENST00000574121 AMTP48728 403 aa10.67□□□□□ -0.7
CCNE1-204ENST00000574121 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
CCNE1-204ENST00000574121 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
CCNE1-204ENST00000574121 TMEM243Q9BU79 118 aa10.67□□□□□ -0.7
CCNE1-204ENST00000574121 LYSTQ99698 3801 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms